Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01504 ATGTCACGGCCGAGGCAGAACAAGATGTTGATGAATCCAAACACTGCCAAACATGTAATTGGTGACACAACCTATACCAAGATCTTTGTTGGAGGCTTAGCTTGGGAAACAAAAAGAGACACTCTGAAACGTTATTTTGATCAGTTTGGAGAGATCTTAGAAGCTGTTGTCATCACTGACAGAAACTCTGGAAGATCAAAAGGATACGGCTTTGTAACATTCAAGGACCCAAATTCTGCAATAAGGGCTTGTCAGAATCCATATCCTGTGATAGATGGAAGGAGGGCTAATTGTAATCTTGCATCTCTTGGTGCACAAAAAATTGATCCATCATCTATGACAGCTACTAGACAAAAATTCAGTAGCCCTTCTTGGAATACAGCACCAATTCCAGTTCATCAAGGAACCTCCACTTATTATAATCAGCATATTCCACAGTATACATTTCCTTATCCACCCTACAGGTATCCAGGTTACCCACCCCAACAGGAAGTATATGAAATGCAGAATTACTATAATGCATATGGTGGACAACACTTTCCATTTCGTTGGTTACCAGCATATTACCAACCAATTTATGGGCTAAGTAGGCATCAATTTGTTCCAACAACAGCTTATGTGAAAAAGACACAATTCCCTGATATGTCACCTCAGGAGTTCACACCTACTGTTGCTTCATCAGAACCTATTTCAGCTTCTTCATCAATTTCTACCACTGGTTTAGTATCCAACTGTGCCATAATTCTGTTTTATTGCACAAACCTATATACGTTGCACAAATACTTCAATAATTTTAGTCACATATATATGCGGCATTAG 819 0.3907 MSRPRQNKMLMNPNTAKHVIGDTTYTKIFVGGLAWETKRDTLKRYFDQFGEILEAVVITDRNSGRSKGYGFVTFKDPNSAIRACQNPYPVIDGRRANCNLASLGAQKIDPSSMTATRQKFSSPSWNTAPIPVHQGTSTYYNQHIPQYTFPYPPYRYPGYPPQQEVYEMQNYYNAYGGQHFPFRWLPAYYQPIYGLSRHQFVPTTAYVKKTQFPDMSPQEFTPTVASSEPISASSSISTTGLVSNCAIILFYCTNLYTLHKYFNNFSHIYMRH 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01504 272 SUPERFAMILY RNA-binding domain, RBD 5 106 IPR035979 GO:0003676
Adu10g01504 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 28 85 IPR000504 GO:0003723
Adu10g01504 272 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 26 103 IPR000504 GO:0003723
Adu10g01504 272 SMART rrm1_1 27 99 IPR000504 GO:0003723
Adu10g01504 272 PANTHER BOULE-RELATED 1 248 IPR037366 GO:0003729
Adu10g01504 272 CDD RRM_RBM24_RBM38_like 26 101 - -
Adu10g01504 272 Gene3D - 2 113 IPR012677 -
Adu10g01504 272 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIF) FAMILY PROTEIN 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01504 Adu-Chr10 65468870 65471530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01504 22 161 C2H2 Transcription Factor Family AT2G19380 30.380 2.86e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01504 - - adu:107469851 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01504 10 65468870 65471530 Adu10g01504 10 65468870 65471530 ECH