Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01487 ATGGCAGCTAGGTATGATCTTATCAAGTGTATCAATGCTGGTCCAGCGCATAAGGTGTGGAAGCTCAAAGTACGTGTCATTAGACTTTGGACCGTTTCTCAATTTGCAAGATCTGGGATGAAGGCACCTATTGAGATGGTTGCCCTTAATGAAGAGGGAGATACAATTCAATGCACTGTAAAAGACATATTTGTTCCTATCTTCAAGGGCTTACTCGCTGAGGGCAACGTGTATGTGGTCACTAATTTTGGAGTTGCTTTGAATACCATCAAGTTCAAGCCTACTAGACACGAATTTAGGATCCATTTCAAGAGGGACACGATTGTGCGTCCGGTACAAGATTCTTCAGTTCCATTGAACGGATTTAATTTTGTTCCGTTCAAAACAATTCAATCAGAGTCTAAAGAAGATGGTTATTTAGTTGATGTGATAGGTCAGCTTGCTTCTAAGGGTAACTTGGTCGAATTCACACGGGACGGGAAGCCGTCAAGTTATATCACCATAGAACTTGATGATCTTGAGGGTAGACAGAAATTAAGGGTAACGTTGTGGCAGTCTTTTACTTTTGAATTGCTCAAATATCTAGAAGAACACCCGTCTCTTACCTATGTGGTTATTCTCCAAATGGGCAAGATGAAATTTTATAGTGGGGTCATGGGTGTATCTAACACAAACTACAATTCGAAACTGTTTATCAAAGTTGAGTTTCCAGCTGCCAGGGATTTCTTTGCGAGGGTGAACAAATTGGATCCTGTTGATGGACAAGGCATAATGCCGCTGGTCTGTGGTCAACCTGTTTCAGATGAGGAGAATTTTTTGCGTCTGTCAGTCTACAAAACAATTGCAGAGATAAAGGAGCATAATCAGGATGCTGTATTTGTTACAGCCGGGACGATTAAAGAAGTTGAGACTAAATTTGGTTGGTGGTACATCATCCACATAAGGGTGATAGACCACACCGATGCTGCCTCTTTTGTTTTGTTCGATGGAGAAGCTGCAAAGTTTCTTGGAGTTTCTGCTAAGGACCTTAGGCAGTCTTGTGTGACTAAGGGTGTTGAGAAAAATTCCTGTCCCGAAGAGATTAATAAGCTTAGGGATATTAAGTTCATCTTCAAAGTGCAACTCAAGATGAGAAATCTGAACTCTTATGAACCATATGTGATTCATGTGCTGAGAATGACTAATGAGAATTCTCTGGTTTCTGCCTTCCTGGATAAATACAATCCTGACACTGGCCTTTTGTCCCATGAAAATTCTGAACTATTGAGTTTGTCTACTGGTCCATACAACACTTCTAAGACTTGTGAGAGTGAGCCAACTCCATCACCTGCAGTTGATGAGAAACATAATTCTAAGATTCTCAGAGCTAAGAAACATATTGAAGAGATTGGAGAGGAGTCAGTTTCATCCAAATCTAAGAAAGGGAAGTGGGTTGTGGTGGAGGACTAA 1449 0.4092 MAARYDLIKCINAGPAHKVWKLKVRVIRLWTVSQFARSGMKAPIEMVALNEEGDTIQCTVKDIFVPIFKGLLAEGNVYVVTNFGVALNTIKFKPTRHEFRIHFKRDTIVRPVQDSSVPLNGFNFVPFKTIQSESKEDGYLVDVIGQLASKGNLVEFTRDGKPSSYITIELDDLEGRQKLRVTLWQSFTFELLKYLEEHPSLTYVVILQMGKMKFYSGVMGVSNTNYNSKLFIKVEFPAARDFFARVNKLDPVDGQGIMPLVCGQPVSDEENFLRLSVYKTIAEIKEHNQDAVFVTAGTIKEVETKFGWWYIIHIRVIDHTDAASFVLFDGEAAKFLGVSAKDLRQSCVTKGVEKNSCPEEINKLRDIKFIFKVQLKMRNLNSYEPYVIHVLRMTNENSLVSAFLDKYNPDTGLLSHENSELLSLSTGPYNTSKTCESEPTPSPAVDEKHNSKILRAKKHIEEIGEESVSSKSKKGKWVVVED 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01487 482 PANTHER REPLICATION FACTOR A 1, RFA1 31 287 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu10g01487 482 PANTHER REPLICATION FACTOR A 1, RFA1 301 404 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu10g01487 482 CDD RPA1_DBD_B_like 142 242 - -
Adu10g01487 482 SUPERFAMILY Nucleic acid-binding proteins 301 394 IPR012340 -
Adu10g01487 482 Pfam Domain of unknown function DUF223 46 135 IPR003871 -
Adu10g01487 482 Gene3D - 310 406 IPR012340 -
Adu10g01487 482 Gene3D - 8 115 IPR012340 -
Adu10g01487 482 PANTHER BNAC07G49340D PROTEIN 31 287 - -
Adu10g01487 482 PANTHER BNAC07G49340D PROTEIN 301 404 - -
Adu10g01487 482 CDD RPA1_DBD_A_like 21 109 - -
Adu10g01487 482 SUPERFAMILY Nucleic acid-binding proteins 15 114 IPR012340 -
Adu10g01487 482 Pfam Replication factor-A C terminal domain 305 382 IPR013955 -
Adu10g01487 482 Gene3D - 116 250 IPR012340 -
Adu10g01487 482 SUPERFAMILY Nucleic acid-binding proteins 122 245 IPR012340 -
Adu10g01487 482 MobiDBLite consensus disorder prediction 429 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01487 Adu-Chr10 63982232 63986028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01487 15 343 Core DNA Replication Machinery Family AT4G19130 22.251 5.16e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01487 - - adu:107477146 900.582