Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01477 ATGGAACGTGACGGTGGCCATAAACAAACTTCTCACAAAACTCCGTACACTCAGCTTGAACAGGTTAGCTCTGATTTCTTTCTAGCAATTGGCCTGCAAGAGCAAAACGCAACAATATTCACAGCGCTCGCAGCGACACTGGAAAGCGAAGGATCCTCCTCGTCGCTTGATAATGAGCAGGAAGACGATGATAACGCTGATTTCTTCACGAGCTATGAGTTTGAAACGGAGGACCTTCAGTTTCTTGAAAGCGAAGGAAGCAACTACGGTGATGACGAAGACATGGATGACTTTGACTTCGACGTGGACGAATTGACATACGAAGAGTTAATTGAGTTGGAAGACTTTATAGGGAAGCAGAAGAGAGGGTTATCAGCAAATGAGGTTTCTTCGTGCTTGCATTCCTACACCTTCGATTCTGTTAACGAGAGGAAAAACAGTGGAACCGATCGGTGCGTGATTTGCCAGATTGAGTATGAAGAAGGTGAAGCGTTGGTGGCACTTCGTTGCGGACATCCTTTCCACACGGATTGCATAAGCAAGTGGCTTCAAGTAAGAAAGGTTCAGAAAATCCTAACCTCCATCACGCCACCATCTATCTCACCGTCGCCACCCTTCACGCTCAAGATCGTAACCAGGTTTGTCGTTATGTTAGCTAGCTCACCATTCCTCTTGCTATTTTGCTTGTCATCCTTCTCGTCGTTCTGCTCGCCTCTCTCTCGCGGTTCTGCTCGCCGTGCTGCTCGAAAATATCCATATACAGACAACCCACAGGGTCTTCCTGAGAGAACAAATGGAGCTGCTGGCGAGTATGCTAGAGCATGCACTTCTGTGGCTGCAGAATGTGGAGTCCCTGTGATTGATCTCTTGGACCAAATGCAGCAGTGCCCCGACTAG 897 0.4783 MERDGGHKQTSHKTPYTQLEQVSSDFFLAIGLQEQNATIFTALAATLESEGSSSSLDNEQEDDDNADFFTSYEFETEDLQFLESEGSNYGDDEDMDDFDFDVDELTYEELIELEDFIGKQKRGLSANEVSSCLHSYTFDSVNERKNSGTDRCVICQIEYEEGEALVALRCGHPFHTDCISKWLQVRKVQKILTSITPPSISPSPPFTLKIVTRFVVMLASSPFLLLFCLSSFSSFCSPLSRGSARRAARKYPYTDNPQGLPERTNGAAGEYARACTSVAAECGVPVIDLLDQMQQCPD 298
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01477 298 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 191 IPR045191 GO:0061630
Adu10g01477 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 190 IPR013083 -
Adu10g01477 298 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED-LIKE 1 191 - -
Adu10g01477 298 Pfam Ring finger domain 151 186 IPR001841 -
Adu10g01477 298 SUPERFAMILY RING/U-box 151 188 - -
Adu10g01477 298 ProSiteProfiles Zinc finger RING-type profile. 152 182 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu10g01477 Adu-Chr10 62709407 62711823 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01477 99 194 C3H Transcription Factor Family AT3G63530 44.330 2.99e-21 89.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01477 K19045 - gmx:100777284 197.978