Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01416 ATGGGAGATTCCTATTGCAACTCTCTTAAAACTGTCAATCCCCGAGCCAATGCCATCGCCATGAAGCAGAGTTTACTCGTCGGCCAACATCGCTCTTTGTCCAATAGCCCTCTTGTATGCCTGCAAATCATTTGTGCCTTTTTTTATCATCCCATAGCTTTCCTCCTCCCCAACACTGACTTGCCCCTCTGGTCAGTGGTGCTTACCACAAGCTTATGCCTTGCATGCCTTCATTTCGTAATGGAAAAAGAACCTCCCAAAACCAAGCAAATACCTGTGGTTGTCATGGCATTTGTTATGAGTGTGTTTTGGATATCTACCACAGTTGGAGAACTGGTGAACTGCCTTGAAACTTCAGGTCTAGTTCTCAAACTACCACCGGCAATCCTCTATTGCTACAAGACTAATTTGAGGTTCCAGAGCCATGCTGTCCTTGCTTTCCACGAAGCTGCTGAAGCCTACTTGGTTGGTTTGTTTGAGGACACCAACTTGTGTGCCATTCATGCCAAGAGGTCACCATAA 522 0.4598 MGDSYCNSLKTVNPRANAIAMKQSLLVGQHRSLSNSPLVCLQIICAFFYHPIAFLLPNTDLPLWSVVLTTSLCLACLHFVMEKEPPKTKQIPVVVMAFVMSVFWISTTVGELVNCLETSGLVLKLPPAILYCYKTNLRFQSHAVLAFHEAAEAYLVGLFEDTNLCAIHAKRSP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01416 173 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 32 130 - -
Adu10g01416 173 SMART h35 101 172 IPR000164 GO:0000786|GO:0003677|GO:0030527
Adu10g01416 173 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 32 130 - -
Adu10g01416 173 Pfam Core histone H2A/H2B/H3/H4 134 172 IPR007125 GO:0003677
Adu10g01416 173 Gene3D Histone, subunit A 112 173 IPR009072 GO:0046982
Adu10g01416 173 PRINTS Histone H3 signature 134 152 IPR000164 GO:0000786|GO:0003677|GO:0030527
Adu10g01416 173 PRINTS Histone H3 signature 168 173 IPR000164 GO:0000786|GO:0003677|GO:0030527
Adu10g01416 173 PRINTS Histone H3 signature 152 168 IPR000164 GO:0000786|GO:0003677|GO:0030527
Adu10g01416 173 SUPERFAMILY Histone-fold 128 172 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01416 Adu-Chr10 53079226 53082614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01416 50 130 Antiporters AT1G08960 66.667 9.19e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01416 K13754 - gmx:100775437 131.339