Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01401 ATGGCGACGCCCCACTGTGGCCCGATGGAGGAGTGGGGACACGATCACGTTACTTGTGCGACTTCTCCCTACAGCAGCGACGTGAACGGAGTGAAGGACCGCACACGTAACTCGCGCAAGGACGGTGACGACCACACACGCAACTCGCACGAGGATGGCGACGTAGCAACAACAGCTTTGGAGGGGGGTAGCACGATTGCGTCACTTGCCGACTTCTCCTTGCAGCAGCGACGCACGCGGCATACAGCGAAGGTGGAGATACGACAGTTTGCGCGAAGAAGgtcctcttcggctcttcatcttcgctggcttctcggcacggacccagTTGCTGATAGTGTTTTACTGATTCTGATGGCAGTTGCTAATAGTGTTTTACCAGTTTTGATGGCAGTTGCTGATAGTGTTTTACTGGTTCTGATGGCTCCTAATTTGTTTGTTGCAATATTGTTGAATGCTGTAGGCATAATTCAGATATGGAAGTTAGGCCAAGGTGGATTTGGAGTAGTGTATAGAGGCTACTTTGCTGATCTAGATTTGGTTGTTGCTGTTAAGAAGATATCAAGTGGATCAAGACAAGGGAAAAGAGAGTATGTAATTAAAGTCAAAGTCATCAGCAAGTTAAGGCATATGAATCTTGTGCAACTCATAGGTTGGTGCCATGATCAAGGTGAGTTCCTTCTTGTTTATGAGTATATGCCAAATGGTAGTCTTCATGAAGAATGGGAACAATGTGTTGTTCATAGAATATCAAACCAAGCAAtgtga 768 0.431 MATPHCGPMEEWGHDHVTCATSPYSSDVNGVKDRTRNSRKDGDDHTRNSHEDGDVATTALEGGSTIASLADFSLQQRRTRHTAKVEIRQFARRRSSSALHLRWLLGTDPVADSVLLILMAVANSVLPVLMAVADSVLLVLMAPNLFVAILLNAVGIIQIWKLGQGGFGVVYRGYFADLDLVVAVKKISSGSRQGKREYVIKVKVISKLRHMNLVQLIGWCHDQGEFLLVYEYMPNGSLHEEWEQCVVHRISNQAM 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01401 255 PANTHER - 161 238 - -
Adu10g01401 255 ProSitePatterns Protein kinases ATP-binding region signature. 162 186 IPR017441 GO:0005524
Adu10g01401 255 MobiDBLite consensus disorder prediction 32 54 - -
Adu10g01401 255 ProSiteProfiles Protein kinase domain profile. 156 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01401 255 SUPERFAMILY Protein kinase-like (PK-like) 159 246 IPR011009 -
Adu10g01401 255 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 161 238 - -
Adu10g01401 255 Pfam Protein tyrosine and serine/threonine kinase 161 240 IPR001245 GO:0004672|GO:0006468
Adu10g01401 255 Gene3D Phosphorylase Kinase; domain 1 162 233 - -
Adu10g01401 255 MobiDBLite consensus disorder prediction 23 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01401 Adu-Chr10 52164617 52171102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01401 161 249 Receptor kinase-like Gene Family AT5G10530 54.622 6.94e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Adu10g01401 PK_Tyr_Ser-Thr 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01401 - - ahf:112722208 191.815