Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01363 ATGTCTCAGAACGGGAAGCTCATGCCCAATCTCAACCAGCACAGCACCAAGCTCCTCAACCTTCATCGAGGAAATCCTCATCACCGCTGCACACGTCACCTTCTACGAGCTCAACATCGACCTCTCCCAATGGGTTCCCACAAGGAGGAGGAAGACGAGGAAGAGGAAGAAGACGACGAGTATGGGCAGAGAGTAGTTACTAGGAAGCACAGGGGCGTCGTCTTTGAGAGCGGATCCGAGGAGAACCGTTACCATGAGAATGAGAATGAGAATGAAGATGAGGAAGTTGATGAAGCTAGGAGTCCAAGGGATTTTGACGATGATGAAGAGGAGGATGGATATGCAGTTCATCATGACATTGAACATGACTCAAATAGATCCCCTGTTGAAGAAGAGAGCCATGAAAAAGGCATGAGGCCAGAGGATATATTGCAGATGAAGATCATAGAGGTTCCGCTGCAACCACCTCCAGCTCTTCCAGAAAAGGTGCCAAACTCAGGTCGTCAAAGTCGGAAACTGAAAAGGCGAGTTGAACATAGCCGATTAGCCGATTCGGATGTTAGTGGAAAATGGTTGAAATGGCAAATTAAAGAATGCACAAAAGCATTAGATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGCAGAAAAGCGTGAAATGATGAAAAGATGA 801 0.4557 MSQNGKLMPNLNQHSTKLLNLHRGNPHHRCTRHLLRAQHRPLPMGSHKEEEDEEEEEDDEYGQRVVTRKHRGVVFESGSEENRYHENENENEDEEVDEARSPRDFDDDEEEDGYAVHHDIEHDSNRSPVEEESHEKGMRPEDILQMKIIEVPLQPPPALPEKVPNSGRQSRKLKRRVEHSRLADSDVSGKWLKWQIKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKAIRRLEPLAAEKREMMKR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01363 266 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 196 265 - -
Adu10g01363 266 ProSiteProfiles TPR repeat profile. 210 243 IPR019734 GO:0005515
Adu10g01363 266 SMART tpr_5 210 243 IPR019734 GO:0005515
Adu10g01363 266 MobiDBLite consensus disorder prediction 61 86 - -
Adu10g01363 266 Pfam Tetratricopeptide repeat 211 243 IPR013105 -
Adu10g01363 266 SUPERFAMILY TPR-like 196 253 IPR011990 GO:0005515
Adu10g01363 266 MobiDBLite consensus disorder prediction 37 137 - -
Adu10g01363 266 MobiDBLite consensus disorder prediction 115 137 - -
Adu10g01363 266 Gene3D Tetratricopeptide repeat domain 165 266 IPR011990 GO:0005515
Adu10g01363 266 MobiDBLite consensus disorder prediction 154 177 - -
Adu10g01363 266 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01363 Adu-Chr10 45238874 45241738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01363 197 253 Calmodulin-binding Proteins AT3G25230 43.860 1.11e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01363 K24926 - adu:110278477 157.147