Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01329 ATGGTTGTGACTTCCTCCGCTATCGCCGCACAAGCTCCTTCCACCGCCGCTCTCAATGCGGTTGCTCCTTTCGTCGTCACACGAGCTCTCTCGGTCGTGCTCTTGTCTTACGAGCTCCCCCCGCTGCCGCTTTCGCGCTGCTTCTTTTCTCCTCGCCGGAGGGCTGGGAATGGGAAACTTATAGTTGTGGACTCCAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTTGTAGACTGGCTCAGAATTGTGAGGCTGCTAAGAAGAGTCGATTGAGGAAGAAGGCATATGTGCAGCAATTGGAGAATAGTAGAGTTAGGCTTGCACAATTAGAGCAAGAACTTCAGTCATCCAATTTCACGGTACATAGATGGCCAAGAATGGGAGGCCATAAATTCATAGGAATGAGAACTCAACATCAAAAGCTGACTAGAAAATATACTTACCTAAATAAGGTTCTTGTTGGGAGCGAGCAAGGTCCTATGCAGCTTTGGAACATTAGCACAAAGAAAAAGATATTTGAGTTTAAGGGATGGAATTCACCGATCACCTGTTGTGTTTCCTCCCCTGCTCTAGATGACGTTGCAGTTGGGTGTGCAGATGGAAGCATTCATGTTCATAACATTCGTTATGATAAAGAATTGGTTACATTTACACATTCTACACGAGGTTCTGTCACTGCCTTATCTTTCTATACTGAAACCCATTCTAGCCTCTGGAGGTTCATCAGGTGTCATAAGCGTATGGAATCTGGAAAAGAAAAGGCTCCAATAAAATGTTGGGAGTATCAAGTTGGCCCTTGTGTAGTTATTGAAGCCGCTGATCATATTTGGTGCTCAAGAATAATCTTCATGAACTCTGGACCCTTCTCAATTTTCTTCTGCCTGAATTTTTTAGCTCTGCTGAAACTTTTGATGAATGGTAAAATGGTTCTATTGGATAAGTTACTTCCTAAGTTAAAAGAGCGTGATTCCCGGGTCCTGATATTCTTACAGGATTGGACAGAAGAAATAAGTACAAGTTTTCCAATTTTGCACGGAGTTGAGCAGAAATGGATGTGGATCCTTCGATGTTCCCACGTGAATTGA 1095 0.4338 MVVTSSAIAAQAPSTAALNAVAPFVVTRALSVVLLSYELPPLPLSRCFFSPRRRAGNGKLIVVDSNDQTKLKHEDQKTLCRLAQNCEAAKKSRLRKKAYVQQLENSRVRLAQLEQELQSSNFTVHRWPRMGGHKFIGMRTQHQKLTRKYTYLNKVLVGSEQGPMQLWNISTKKKIFEFKGWNSPITCCVSSPALDDVAVGCADGSIHVHNIRYDKELVTFTHSTRGSVTALSFYTETHSSLWRFIRCHKRMESGKEKAPIKCWEYQVGPCVVIEAADHIWCSRIIFMNSGPFSIFFCLNFLALLKLLMNGKMVLLDKLLPKLKERDSRVLIFLQDWTEEISTSFPILHGVEQKWMWILRCSHVN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01329 364 Coils Coil 96 123 - -
Adu10g01329 364 SMART WD40_4 171 210 IPR001680 GO:0005515
Adu10g01329 364 SMART brlzneu 73 158 IPR004827 GO:0003700|GO:0006355
Adu10g01329 364 Gene3D - 144 241 IPR015943 GO:0005515
Adu10g01329 364 PANTHER WD REPEAT-CONTAINING PROTEIN 36 145 237 - -
Adu10g01329 364 SUPERFAMILY Leucine zipper domain 81 126 IPR046347 GO:0003700|GO:0006355
Adu10g01329 364 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 95 IPR004827 GO:0003700|GO:0006355
Adu10g01329 364 SUPERFAMILY WD40 repeat-like 153 235 IPR036322 GO:0005515
Adu10g01329 364 Pfam Basic region leucine zipper 75 120 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01329 Adu-Chr10 36782023 36791698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01329 58 118 bZIP Transcription Factor Family AT1G68640 68.852 4.33e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu10g01329 bZIP_2 8.6e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01329 K14554 - adu:107469594 219.55