Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01292 ATGGGTTCGGTTCCTGCAGAACTGAGCTTAGACATTAGAGCACCAACGCCACCACCCCCACCACCACCGTCAACACCGAGTTTCATTCCCAAAACCATAACTGATTTCCTCTCCGCGCTTTCAACCACGGGAATCACCGCATCTGAGAAGCAATCCAGGATCAACGGTTTCCTCTCTCACTTGGAAGACGAATACAACAAGATCCACGCCTTCAAGCGCGAGCTTCCTCTCTCCATGCTCCTCCTCAGCGACGCAATTGTGGCACTGAAAGAGGAATTGGAGAAATGCAGTGAAGGTGAGCGTAAATCTGAGCCAGTGCTGGAAGTGTTCATTCCTTTGAAGAGAGAGTTCGATCATAGCGAAGACGATGAAGAACATAATAATAATAATAATAATAATGATAATAACAACAACAATAACAATATTCGACAGGAGAAAGAATGCAGAGATAAGATGAGTTGGATGAGTTCCGTTCAGCTCTGGAACGCTTCTTCTTCAACCACACTTAACAATAATAATAATAATAATGCCTTTGATAATAATCACAAACACCATCACCAAAATCATCATCATAAATTCGGAACAAAGAAGAATCAGGAATATGTGGTTGAGAATCCTTTTCAATCTCATAGCAATGTTAGAAATAATGGAGGAAGAGGGTTTATGCCTTTTACTTCATACACTTCTTGTTCAGTGCCGGTCACTACTGTGGCTCTCTCTGCAACCAAAGAAGAGAAGGAAGATATTGGTGCTATTAATAGGCTTCCTCTGTTGACCCCTGCTGCTGCTGGTGGTGGAGTGAAGACTCTCAGGGAAGGTTCTGGTTCGAGTGGATCCAGAACCAGCTCCAACAACAGGCCGGTTTCCACGTCTTCTCCTCCGGCGGCTGCACACCGCACTGCCATGATGCCTCTTCAGCCTCAGCAGACTGCTAGGAAACAGAGGAGGTGCTGGTCCCCGGAGCTGCACCGACGATTTGTCAATGCGTTGCAAAAGCTTGGTGGTTCTCAAGTGGCAACACCAAAGCAGATTAGAGAACTCATGCAGGTTGATGGACTCACAAACGATGAAGTGAAGAGCCATTTACAAGTGAGTTCTCGCTATTCCAATTTTGTTGTGTCTATTTTTGTTTTGGGGATGAGGCAATTATGGGAAAAAAGCAACTAA 1167 0.4499 MGSVPAELSLDIRAPTPPPPPPPSTPSFIPKTITDFLSALSTTGITASEKQSRINGFLSHLEDEYNKIHAFKRELPLSMLLLSDAIVALKEELEKCSEGERKSEPVLEVFIPLKREFDHSEDDEEHNNNNNNNDNNNNNNNIRQEKECRDKMSWMSSVQLWNASSSTTLNNNNNNNAFDNNHKHHHQNHHHKFGTKKNQEYVVENPFQSHSNVRNNGGRGFMPFTSYTSCSVPVTTVALSATKEEKEDIGAINRLPLLTPAAAGGGVKTLREGSGSSGSRTSSNNRPVSTSSPPAAAHRTAMMPLQPQQTARKQRRCWSPELHRRFVNALQKLGGSQVATPKQIRELMQVDGLTNDEVKSHLQVSSRYSNFVVSIFVLGMRQLWEKSN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01292 388 MobiDBLite consensus disorder prediction 272 296 - -
Adu10g01292 388 Pfam Myb-like DNA-binding domain 315 363 IPR001005 -
Adu10g01292 388 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 25 363 IPR044787 GO:0003700|GO:0006355
Adu10g01292 388 MobiDBLite consensus disorder prediction 263 312 - -
Adu10g01292 388 MobiDBLite consensus disorder prediction 119 142 - -
Adu10g01292 388 PANTHER TRANSCRIPTION FACTOR HHO6 25 363 - -
Adu10g01292 388 SUPERFAMILY Homeodomain-like 310 364 IPR009057 -
Adu10g01292 388 MobiDBLite consensus disorder prediction 1 26 - -
Adu10g01292 388 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 313 364 IPR006447 GO:0003677
Adu10g01292 388 Gene3D - 312 369 - -
Adu10g01292 388 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 310 364 IPR017930 -
Adu10g01292 388 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01292 Adu-Chr10 32063374 32066757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01292 29 377 G2-like Transcription Factor Family AT4G37180 32.479 2.25e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu10g01292 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01292 - - adu:107470076 624.009