Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01274 ATGGGAGGAGATCGTGATGGTAACCCTAGGGTAACCCCTGAAGTTACAAGGGATGCAGCTGATGTATTCCTGCTAGCATTCTCTCTCATAAGCAGGGCTAGCTATGAAAATGTTGCCAAGAAATGGATTCCTGAGTTGAGGCATTATGCTCCTGGTTTTCCAATTATTCTTGTTGGAACAAAATTTGCGCCTATCACCACAGTGCAGGGTGAGGAACTGAGAAAACTTATTGGTGCTCCAGTTTACATCGAATGTAGTTCAAAAACACAGCAGAATGTGAAGGCTATTTTTGATGCGGCCATCAAAGTAGTTCTCCAGCCTCCAAAGCAGAAGAAAAAGAAGAGAAAGGTCTTTGCCATTCTATATCTTTGCTGCATAACACATGATGGTGTTGGTGTTCCGGAAACATTACTGAACCAAATGTTCGGACGAGAGGGACAAGAATCCGAGGAGGGTATTAGTCTGCTCATCAGCAGAAAGTTGCTGAAGCTGATGAATGGAGACGTGCGGTATCTGAGGGATGCTGGCAAATCATCTTTCATCTTAACAGTTGAACTGGCTGCTTCCCAGAAATTGATTGCTTAA 585 0.4376 MGGDRDGNPRVTPEVTRDAADVFLLAFSLISRASYENVAKKWIPELRHYAPGFPIILVGTKFAPITTVQGEELRKLIGAPVYIECSSKTQQNVKAIFDAAIKVVLQPPKQKKKKRKVFAILYLCCITHDGVGVPETLLNQMFGREGQESEEGISLLISRKLLKLMNGDVRYLRDAGKSSFILTVELAASQKLIA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01274 194 Pfam Ras family 19 105 IPR001806 GO:0003924|GO:0005525
Adu10g01274 194 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 122 183 IPR036890 -
Adu10g01274 194 ProSiteProfiles small GTPase Rho family profile. 1 104 - -
Adu10g01274 194 PANTHER SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 15 117 - -
Adu10g01274 194 SMART rho_sub_3 15 107 IPR001806 GO:0003924|GO:0005525
Adu10g01274 194 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 91 186 IPR003594 -
Adu10g01274 194 PANTHER RHO FAMILY GTPASE 15 117 IPR003578 GO:0005525|GO:0007264
Adu10g01274 194 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 1 26 IPR015813 GO:0003824
Adu10g01274 194 PRINTS Transforming protein P21 ras signature 82 104 - -
Adu10g01274 194 PRINTS Transforming protein P21 ras signature 51 64 - -
Adu10g01274 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 112 IPR027417 -
Adu10g01274 194 SMART rab_sub_5 8 107 - -
Adu10g01274 194 Gene3D - 4 110 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01274 Adu-Chr10 31456114 31458809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01274 126 191 Histidine Kinase Gene Family AT1G09570 71.212 1.50e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01274 K04392 - gmx:100785464 155.992