Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01233 ATGAACTATATATTTGAATTGCTGAGATATTTTATCTGGAGTTTGCATGCATATTCTTGTTATGACTTGATTTTGGCTCCTCCTTCTTGTCCTTGTCTGAATCTGCTGAATTACAGACAGATAACTCATTCTTTTCAGGCTGGGAAGGGAAAACTTGTAGTTGTGGACTCCAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTCGTAGACTGGCTCAGAATTGTGAGGCTGCTAAGAAGAGTCGATTGAGGAAGAAGCAATTGGAGAATAGTAGAGTTAGGCTTGCACAATTAGAGCAAGAACTTCAGTCATCCAATTTCACGGTACATAGAAGGCCAAGAATGGGAGGCCATAGATTCATAGGAATGAGAACTCAACATCAAAAGCTGACTAGAAAATGTGATATTCGCGGCAACATTTTCTTGTGGGCATTTAAGGGAGTTATGGATCAGAACCCTTCCCCATTTGGGCACATTTTGCTTGATCAGAGTTTTAGCCCCAGCTGTATAATGCATCCAGATACTTACCTAAATAAGGTTCTCGTTGGGAGCGAGCAAGGTCCTATGCAGCTTTGGAACATTAGCACAAAGAAAAAGATATTTGAGTTTAAGGGATGGGATTCACCGATCACCTGTTGTGTTTCCTCCCCTGCTCTAGATGTCGTTGCAGTTGGGTGTGCAGATGGAAGCATTCATGTTCATAACATTCATTATGATAAAGAATTGGTTACATTTACACATTCTACACGAGGTTCTGTCACTGCCTTATCTTTCTGCACTGATGGGAAACCCCTTCTAGCCTCTGGAGGTTCATCAGGTGTCATAAGCGTATGGAATCTGGAAAAGAAAAGGCTCCAGCCAGTTGTAAGAGAGGCTCATGATAGTGTGATCACATCACTACATTTTTTTGCAAATGAGCCAGTGCTTATGAGTTCTTCAGCAGATAATTCTATTAAGATAAAATGTTGGGAGTATCAAGTTGGCCCTTGTGTAGTTATTGAAGCCGCTGATCATATTTGGTGCTCAAGGTACATCCTTGAGATAATTAATAATCTTCATGAACTCTGGACCCTTCTCAATTTTCTTCTGCCTGAAACTTTTAGCTCTGCTGAAACTTTTGATGAATGGTTCCAAATATCAGGTAAAATGGTTCTATTGGATAAGTTACTTCCTAAATTAAAAGAGCGTGATTCCTGGGTCCTGATATTTTTACAGCAAGGCCATGGAGCAAAAGAAATAATTGAGCAGAAATGGACGTGGATCCTTCGATGTTCCCACGTGAATTGA 1296 0.4028 MNYIFELLRYFIWSLHAYSCYDLILAPPSCPCLNLLNYRQITHSFQAGKGKLVVVDSNDQTKLKHEDQKTLRRLAQNCEAAKKSRLRKKQLENSRVRLAQLEQELQSSNFTVHRRPRMGGHRFIGMRTQHQKLTRKCDIRGNIFLWAFKGVMDQNPSPFGHILLDQSFSPSCIMHPDTYLNKVLVGSEQGPMQLWNISTKKKIFEFKGWDSPITCCVSSPALDVVAVGCADGSIHVHNIHYDKELVTFTHSTRGSVTALSFCTDGKPLLASGGSSGVISVWNLEKKRLQPVVREAHDSVITSLHFFANEPVLMSSSADNSIKIKCWEYQVGPCVVIEAADHIWCSRYILEIINNLHELWTLLNFLLPETFSSAETFDEWFQISGKMVLLDKLLPKLKERDSWVLIFLQQGHGAKEIIEQKWTWILRCSHVN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01233 431 Coils Coil 91 111 - -
Adu10g01233 431 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Adu10g01233 431 ProSiteProfiles Trp-Asp (WD) repeats profile. 249 291 IPR001680 GO:0005515
Adu10g01233 431 Gene3D - 350 391 IPR038718 -
Adu10g01233 431 SUPERFAMILY WD40 repeat-like 141 335 IPR036322 GO:0005515
Adu10g01233 431 Gene3D - 141 323 IPR015943 GO:0005515
Adu10g01233 431 Pfam Anaphase-promoting complex subunit 4 WD40 domain 219 305 IPR024977 -
Adu10g01233 431 SMART WD40_4 242 282 IPR001680 GO:0005515
Adu10g01233 431 SMART WD40_4 199 238 IPR001680 GO:0005515
Adu10g01233 431 SMART WD40_4 285 327 IPR001680 GO:0005515
Adu10g01233 431 PANTHER WD REPEAT-CONTAINING PROTEIN 36 137 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01233 Adu-Chr10 28980409 28984843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01233 49 106 bZIP Transcription Factor Family AT1G68640 62.903 1.74e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01233 K14554 - adu:107469594 537.724