Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01210 ATGGATGTTGACTCGGAACCACTCAGTTCACAAGACAATGTCGAAGATCCCATGATGACTAGTGTGGAAGAAAATGTTAACTGCACTTGTGATTGTGGTGGCAGCAGTAGTGATACAGCACGTGGAAAAGATGAAACACAGCGCAGAAGGAGGTTTTTTTGCAGCAAGGAAGGAAAGAGAGCCGAGAAATACATATCTAGTTTGAGTAGGAAGCGGGAGCATAGAGCGCTGACTCGCACTGGTTGTGAAGTCATGCTTGCGGTGTATCTTGACACTAAAACTTCGACTTGGAGGGTTAAAAAATTAGTCGAGAAGCACAACCACGATCTTGTCCCACAATGCTTGGTACACCTAATTCCAAACCACCGAGGGTTGACTGAGCCACAAAAAGCTCAGGCGAATATACCATGCATGATCATGGTCTTTGCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGCCGGTGGTTATGCCAATATCGGGTTCACAAAGAAGGACCTAGATAATCACTTTCAAAGAGCTCGTCGTGCAATGCTCATTGGTGGGGATTCCAATGCGACGATTAGCTATCTACTTGGGAAAGCAGATGTCGACCCGATGGCCATGACAAGaacaacatcaaggtgtgaggcgATAAACAACTTCATTAAGAGGTTTATTGGCATTCGCCAAAGTCTTCTAGAGTTGGTCAAAAATCTTGAACATGCTCTTAGGGACTATAGAAACAATGAATTAGTTTCTCAATTTAAGACGCTGTATGGGGAGCCCGTTCTAACTACTGGGCTAGAAGCGTTGGAGCTTTCTGCTGCCAATTTTTACACTAGGGAGATTCTTGGAGAAGTAAAAAAGGAGATTCAAGGAGTAGTCGCATTAGATGTAATAAATGAGGAAAACATATCAACCACTGTTGTGAAAAAAATTAAGGAGTGTGACAGGAGACAACATATTTATAACGTACTTTACGATCGCAATACTGAGCATATGGAGTGTGAATGTAGTCGGTGGAGTAGTGAAGGCATTCCTTGCAGGCACATGTTTTGTGCAATGAAAAGGGTAGGTTTACCGAAGTTGCCAGATAGTCTTCTTTTGAGAAGATGGTCGAAGGATGCCAAGAAGTATCTGGATGAAAGTTCTGCTGGAGGCACTACGCAAGACAGAGAAAGAGAATTTTTAATGCGCTATGGCGCATTGTCAGTGGTAGCTACGTGGATGGTATTCTTAGGAGCTCAAGATGGTCCTTCTTTCCATGACACTATGAATGAAGTCTGTCGTTGGACCAAACACTAG 1290 0.4256 MDVDSEPLSSQDNVEDPMMTSVEENVNCTCDCGGSSSDTARGKDETQRRRRFFCSKEGKRAEKYISSLSRKREHRALTRTGCEVMLAVYLDTKTSTWRVKKLVEKHNHDLVPQCLVHLIPNHRGLTEPQKAQANIPCMIMVFATSKIMGLMVGQAGGYANIGFTKKDLDNHFQRARRAMLIGGDSNATISYLLGKADVDPMAMTRTTSRCEAINNFIKRFIGIRQSLLELVKNLEHALRDYRNNELVSQFKTLYGEPVLTTGLEALELSAANFYTREILGEVKKEIQGVVALDVINEENISTTVVKKIKECDRRQHIYNVLYDRNTEHMECECSRWSSEGIPCRHMFCAMKRVGLPKLPDSLLLRRWSKDAKKYLDESSAGGTTQDREREFLMRYGALSVVATWMVFLGAQDGPSFHDTMNEVCRWTKH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01210 429 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 49 192 - -
Adu10g01210 429 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 203 387 - -
Adu10g01210 429 Coils Coil 224 244 - -
Adu10g01210 429 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 203 387 IPR031052 GO:0006355
Adu10g01210 429 Pfam FAR1 DNA-binding domain 41 112 IPR004330 -
Adu10g01210 429 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 49 192 IPR031052 GO:0006355
Adu10g01210 429 SMART 26again6 329 356 IPR006564 GO:0008270
Adu10g01210 429 ProSiteProfiles Zinc finger SWIM-type profile. 318 354 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01210 Adu-Chr10 28113981 28117628 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g01210 FAR1 8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01210 - - adu:107469612 461.07