Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01196 ATGTGGCAAGCTTCTTATGTGAACACGTTTTGGTTGGGCATAGTGACAAGTTCAGCTGATGGGACACTTGGTCAGGGAGAAGCAGCGGTAGCTACTTCCCCTAGCCTCCGCCGCAGTAAGCTAACCCTAGCCTCCACTATCACTTGTCGCCGTCAGTGGGAGTGGTACACCGCACCCCGCCGTTCGTCGCACCCAAGGAATTCCGCTGTGGTGCTCTCGTTCCTATTCCTATCTCCTCCGCGTCCGTTGCTCGCCTGTCCGACCTGTGCTAGGCTGCTCGCGCTTTCGTTCGCCAGTGAATGGTCTAGCTCTGCATGGTGGTTGCTGCCCGCCGTCCGTGCCTGTAGGTGTCGATTCTGCCTCCCAGTGTCACCCGAGTGTCGTCGCAATTACTGGGTTCTTGTGTTTCGGCTTTCTCGTTGTCGGCAGGAGAAGGAACTCGTGGGAAATCCTGATTGCTTGCCTCCCGAGAGGTGGTCGCGGAGTCGCAGTCGCCTGTTGGTGAGTCTCTGCACCATGCCTACCATGTTCCATATTGTTCAGATTTTCCTTCTCGTCCTATTGTTGCCTGCTTTAAGAATTTGGCACTGTGTTGGGAATATTTTGATGGACGTTCCCCAGGCTGTTGACATTAATGCAATGTGTGACAAGGGGACAGGTGTGATGGGCGCTGTCGATTTTGGAGATGTAGCTGATATAACGAAAAATGATATTTTGAGGAAGGTGTTTCGTAGCGAAGGCGATGCATATGAGTTTTATAAGAGATTAGGAAAATTCTACAGGTTTGGTATTAGAAGGGGAGATATGTTCAAGGATGAGAAGGGTAATTTGGTTTGGAGAAGATTTTTTTGCAATAGAGAGGGACAGAGAGATAAGAAACATTATAACAGGATCGACAGGAAGAGGTCTCACAAGCCAGAGACAATGACGAATTGTGAAGCAAGAATGTGTATATATTTAGATAAGGAAAGCTCATTGTGGAGGGTCAAGAAAATTATTTTGAACCACAACCACGACATGACTCATCCTGGAATGGTTCATCTAATTACACGTTTTCGTTCGGTGACGGATGTTGCGAAAGCCCAATTAAATGGGTTTCAAGGTTGTGGCATCTCCACGGCAAAGACAATGCGGTACATGGCTGGAGTATCTGAAGGGTATTCATTTGTAGGTTTTTTGAAGAAAGATGCTTACAACTACATGGATAAGAAGCGTCATGCAAAGATAGTTGACGGAGACGCGAACGCACCTATAGTGTACTTGGAGGGTAAAGTCGATGTAGACCCGACTTCGATGGTAAGGTATAATGTGATAGACGACGAGATCCTAGCAAATTTACTTTGGGCCGACGGTGGCAACAGGATAGATTACCAATACTTTGGAGACGTACTTGCATTTGACTCAACTTACAAAAAGAACAAATACAAGAGGCCGCTGGTGATTTTCTCAAGATGTAATAACCACAAGCAAACATGTATTTTTGGGTTTGGTTTGGTGTTAGATGAGAGCATTGCATCATATACGTGGCTGTTGGAGAATTTCTTGGAGAGTGGGCTTAGGCCGCAGCCGATTATGGCTTGCAGGATGCACTATGGTGGGACCAAGTTTATGGGAAAAAGGAGATGTGGGCAAACACTTTCCTGTGTGAAAAATTCTGTGCCGGAACATCTTGTGCGGGAGTATAAGAACAATGAATTTCAGGCACAGTTCAGGTCTATTTATAGCGAACCGGTGCTGACAACCTCGCTGGAAACCCTTGAGCGTCATGCAGCTTTTGTTTACACAAGAGCGGAACATATATTTTTTGTGATGAAGCATGAACACTTGTTGACAATACCTAGTAGTCTAGTGTTGAAGCATTGGACCAAAGAAGCAAAATTATTAGACGCATACGCCGAGAAAACAGATGACGAGGGTGATAGAGGGTTCTTGCTTCGCCATGGAGCACTTCATTCGGCGTCCCGATGGTTGTTCTTTTTAGGGGCCCAGCAGGTTGGGTTATTCGCTGTTGCTTTGGAGGGGATTCGCCGACTATGTGCAACCTTGGAATCAGAGTTGGCCAAATGTGTCCATCCTACGAACTCTAAGGCACGTGGTGAAATTCAAGATCATGTTGTTGTGCGAACAAAGGGAGCACCAAGGGGTCATCAGAGGAAGGCGTCCAAGAGACAGTGTGCCAACTGCAACAAGCCGGGGCATACTAAGAGGACTTGCACAGACGGAAGGCCTCGTCGGGAAAAAAAAGCCCGAGTGGATACATTCAATTCGGCTGAGGACGAGGGACAAAGTGAGGAGCTGGCTAAACTGGACGTGACCGGATCCAATGATCAAACTATCGGGGTAGAAGATGTGTTCATAGGTGGGTCTCTTCGAATGCCGTAG 2382 0.4736 MWQASYVNTFWLGIVTSSADGTLGQGEAAVATSPSLRRSKLTLASTITCRRQWEWYTAPRRSSHPRNSAVVLSFLFLSPPRPLLACPTCARLLALSFASEWSSSAWWLLPAVRACRCRFCLPVSPECRRNYWVLVFRLSRCRQEKELVGNPDCLPPERWSRSRSRLLVSLCTMPTMFHIVQIFLLVLLLPALRIWHCVGNILMDVPQAVDINAMCDKGTGVMGAVDFGDVADITKNDILRKVFRSEGDAYEFYKRLGKFYRFGIRRGDMFKDEKGNLVWRRFFCNREGQRDKKHYNRIDRKRSHKPETMTNCEARMCIYLDKESSLWRVKKIILNHNHDMTHPGMVHLITRFRSVTDVAKAQLNGFQGCGISTAKTMRYMAGVSEGYSFVGFLKKDAYNYMDKKRHAKIVDGDANAPIVYLEGKVDVDPTSMVRYNVIDDEILANLLWADGGNRIDYQYFGDVLAFDSTYKKNKYKRPLVIFSRCNNHKQTCIFGFGLVLDESIASYTWLLENFLESGLRPQPIMACRMHYGGTKFMGKRRCGQTLSCVKNSVPEHLVREYKNNEFQAQFRSIYSEPVLTTSLETLERHAAFVYTRAEHIFFVMKHEHLLTIPSSLVLKHWTKEAKLLDAYAEKTDDEGDRGFLLRHGALHSASRWLFFLGAQQVGLFAVALEGIRRLCATLESELAKCVHPTNSKARGEIQDHVVVRTKGAPRGHQRKASKRQCANCNKPGHTKRTCTDGRPRREKKARVDTFNSAEDEGQSEELAKLDVTGSNDQTIGVEDVFIGGSLRMP 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01196 793 PANTHER OS03G0181600 PROTEIN 231 518 - -
Adu10g01196 793 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 231 518 IPR031052 GO:0006355
Adu10g01196 793 ProSiteProfiles Zinc finger CCHC-type profile. 725 740 IPR001878 GO:0003676|GO:0008270
Adu10g01196 793 MobiDBLite consensus disorder prediction 711 763 - -
Adu10g01196 793 SUPERFAMILY Retrovirus zinc finger-like domains 711 745 IPR036875 GO:0003676|GO:0008270
Adu10g01196 793 Pfam FAR1 DNA-binding domain 251 340 IPR004330 -
Adu10g01196 793 Pfam MULE transposase domain 463 524 IPR018289 -
Adu10g01196 793 Gene3D - 699 753 - -
Adu10g01196 793 MobiDBLite consensus disorder prediction 735 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01196 Adu-Chr10 27791814 27796859 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g01196 FAR1 3.2e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01196 - - adu:107469631 685.641