Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01175 ATGGAAGAAAGCATGTCAGGCTTTTGCATAAGCGACGGAAGAGGAAGTGTTGCTAATAACAATAATAGTGGCGGAAGTGGAACAAAGTGTGGGCGTTGGAACCCAACAACCGAACAAGTGAAGGTTCTGACAGAACTTTTCAGCTCTGGACTCAGAACTCCAAGCACCGATCAGATTCAGAGGATCTCTAATCAGCTCAGTTTCTATGGCAAAATTGAAAGCAAGAATGTCTTCTATTGGTTTCAGAATCATAAGGCTAGGGAGAGACAGAAAAGAAGAAGGCTTTCTTTTGATCATGATCATGGAGGTGGTGGAGTTGGAGATAATCATAGCACCATCAATATTAATCATTCTTCTACACAAAGTTTTGCACAGCTGTATTCAGAATCAGAGAAGGTGATTGAGACTCTTCAACTATTTCCATTGAACTCCTTTGGTGAATCAGAATCATCAGACAAGCTGAGTAGTAGGGTGCATGCAAATGATCAATGCCGGGATAATAATAATTTGATGTTCTCTTACACCATGGGGGAACAAATTGATCACCCTCCATTAGACCTTCGCTTAAGTTTCATGTAA 579 0.4076 MEESMSGFCISDGRGSVANNNNSGGSGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQRISNQLSFYGKIESKNVFYWFQNHKARERQKRRRLSFDHDHGGGGVGDNHSTININHSSTQSFAQLYSESEKVIETLQLFPLNSFGESESSDKLSSRVHANDQCRDNNNLMFSYTMGEQIDHPPLDLRLSFM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01175 192 CDD homeodomain 32 92 IPR001356 GO:0003677
Adu10g01175 192 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 180 IPR044555 GO:0003700|GO:0099402
Adu10g01175 192 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 180 - -
Adu10g01175 192 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Adu10g01175 192 SUPERFAMILY Homeodomain-like 31 93 IPR009057 -
Adu10g01175 192 SMART HOX_1 28 95 IPR001356 GO:0003677
Adu10g01175 192 MobiDBLite consensus disorder prediction 13 33 - -
Adu10g01175 192 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Adu10g01175 192 MobiDBLite consensus disorder prediction 11 33 - -
Adu10g01175 192 Gene3D - 29 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01175 Adu-Chr10 26387534 26388901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01175 14 192 Wox Gene Family AT3G11260 56.085 8.76e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu10g01175 Homeodomain 2.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01175 - - adu:107469676 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01175 10 26387534 26388901 Adu10g01175 10 26387534 26388901 ECH