Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01171 ATGGAGGGAAAGGAACAAGATGTGTCATTGGGAGCTAACAAGTTCCCAGAGAGACAGCCGATCGGGACGGCGGCGCAGAGCCAAGACGATGGGAAGGACTACAAGGAGCCACCACCAGCTCTGCTATTTGAGCCTTCAGAACTGACCTCGTGGTCGTTCTACAGGGCCGGAATAGCGGAGTTCGTGGCCACTTTCCTCTTTCTATATATCACAATCTTGACGGTTATGGGAGTGAATAGGTCTTCTTCCAAGTGCGCCACTGTTGGTATTCAAGGAATTGCTTGGTCCTTTGGTGGCATGATCTTTGCCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCATATTAACCCGGCAGTGACATTTGGTTTGTTCTTGGCGAGGAAGTTGTCTTTGACGAGGGCAGTATTCTATATGGTAATGCAGTGCCTTGGAGCAATTTGCGGTGCTGGAGTTGTTAAGGGCTTCGAGGGCAAAACCTTCTACGGCAGCCACAATGGCGGTGCCAACTTCGTCGCCCCTGGTTACACCAAAGGCGACGGTCTTGGCGCTGAGATTGTTGGCACCTTTATTCTTGTCTACACCGTCTTCTCTGCCACCGATGCCAAGCGCAACGCACGAGATTCTCACGTTCCACTTTTGGCACCATTGCCAATTGGGTTCGCTGTGTTCTTGGTTCACTTGGCTACTATTCCCATCACCGGAACCGGTATCAACCCTGCTCGGAGTCTTGGTGCTGCGATCATCTTCAACAAAGACCTCGGTTGGAATGACCATTGGATTTTCTGGATGGGTCCTTTCATTGGAGCAGCTCTTGCGGCTCTCTATCACCAAGTTGTGATCAGGGCCATGCCTTTCAAATCTAGCTAA 870 0.5103 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYKEPPPALLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGKTFYGSHNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWNDHWIFWMGPFIGAALAALYHQVVIRAMPFKSS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01171 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Adu10g01171 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 MobiDBLite consensus disorder prediction 1 33 - -
Adu10g01171 289 Gene3D Glycerol uptake facilitator protein. 41 288 IPR023271 -
Adu10g01171 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 288 IPR034294 -
Adu10g01171 289 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
Adu10g01171 289 TIGRFAM MIP: MIP family channel proteins 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Adu10g01171 289 PANTHER PLASMA MEMBRANE INTRINSIC PROTEIN 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01171 Adu-Chr10 26198513 26202014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01171 1 289 Major Intrinsic Protein MIP AT4G23400 83.737 1.31e-172 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01171 K09872 - gmx:100791447 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01171 10 26198513 26202014 Adu10g01171 10 26198513 26202014 ECH