Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01167 ATGTCGTTGGGTGTGTATGGTTCTTCAGGGTCCTCTGATGACGACGACAGTACTAGCTTATTTGGCATAGGAACAAGTCACTCGGAATCAAACAAAGAATCGCATCGCTCACAAGGGGAAGTTCACGGCAAGGTGCCTGTGTTACTTACCGCAGAGGACTTCTTACATACAGTTTTCACTTCTGAGGAGGAGGCTTACAATGCTTACAAGGAGTTTGCCTGGACAAGGGGTTTTGGTGTTCGCAAGGGGGATGTGGGATGGGTTGACAGTGTTTTGGTGAGGCGGGACATCTTCTGTCATCATCAGGGCACGAGGAGTGACAAGCATTATGATAGGCCAGAACGAGTAAGGGAGGAGCGGCTGGAGAGTCGCACGGACTGCAAGGCAAAATTGAAAATATACTATGATGTCCATGATAATGTGTGGAGAGTGCGGAAGATTATTGATGAACACAGCCACGACATGGCTCCGGCTGCGTTTTGCAACCTGTTGCCAAGCCACCGAAAAATGAGCGACGGGGATAAGGCTCAAGTGAATAGCATGAAGCAATTTGGAATCCCTACCTCGAAGATAATGGCTTACATGGCAGGCCAATCGAGTGGCTATAGCATGCTTCGGTTTACAAAAAGGGATTTGTACAACTATGTTCACAGTCAATGGCGAGCACGAATCTTGGATGGAGATGCAGCTGCAACTATAAGCTACTTAGAGGGGAAGGCAAATGCGGACCTTATGTCAGTCGCCAGATACACAACGACTGCAGATAATCGGTTGGGTAACTTATTTTGGGTGGACGGTATCATGAAATCCGATTATGAGTTGTTTGGTGATGTCCTTGCATTTGACGCGACATACCGTGGGAATAAggtcatgaaagattatcggaacaatgaGGTTACTGCACAATTTTACTCCACTTATTACACACCCGTGTTAAGTACTGGATTAGATGCAATAGAGTTGTCTGCGTCGAAGCTTTATACAAGAGCTGTTTTTAGGGAGGTTAAGAAGCAAATCAAGGGTGTTGCAACGCTATTGTTTCAGGGAAGGGAGAGCATCAGCACGACCATTGTGTATAGCTTTAGTAAAATGGGTAGACCGGACCGGGCGCTGTGTAAGATTGCAAAAGACTGTACAACGTTGAAAATGGGGAATGATTCAAGGGATCAGGCAAGACTGCTTCGATACAGTGCACTATACTCAGCTTTGTCCCATGTTGTTACACTTGGTTGCGAAGAGGTTGAAGATTTTGCACTTGCACAGGATGCTATAGCAAATCTGGTTGATATATTGCAACGACGCCGTGTGGAAAAGGATGGTAACAAGGTTTTGCCCAACAACAAATGTGGGGTCAAAGACCCTACAATGGCAGCTACAAAGGGTGCACCGAAGCGGAGAAAAGCCAATTTATGTGCCTCCGAGGAGGAGCCGAAACCAAAGAGGCGTTGTTGCACTAAGTGTGGGGTTCCCGGACATACAAGAAGAACATGTGCAGGCCACGATGCGAAGGCTGTACCAGAGGGATCAGAAGCACCATCATCAGCTTTCGCTGAGTCTTCATTCGCCAATGGACAGAAGGTTACATCTAGCCGTAGCCAAGGAGGTGCACCATTAGGCATGGCCCCTACTCAATCGAACGTGTCGCGGTTCGCACCTTCTGGAGGTGGAGGCAATATATTCTTGGGTGGGCAACGCATAGACCATTTTTATGCAACACCTACCTGTGGACCAATGTCATCCGCCCCATGCTATTCTCCTTCTTTCGTCCCAGGTGTGATTCATAGCGGACCCCATGGTGCCTCGACAAGTCTTGGTAGCGAGGCAATTGAGAGGTGGATTTTGGAGGTAACTCTTTGA 1857 0.4712 MSLGVYGSSGSSDDDDSTSLFGIGTSHSESNKESHRSQGEVHGKVPVLLTAEDFLHTVFTSEEEAYNAYKEFAWTRGFGVRKGDVGWVDSVLVRRDIFCHHQGTRSDKHYDRPERVREERLESRTDCKAKLKIYYDVHDNVWRVRKIIDEHSHDMAPAAFCNLLPSHRKMSDGDKAQVNSMKQFGIPTSKIMAYMAGQSSGYSMLRFTKRDLYNYVHSQWRARILDGDAAATISYLEGKANADLMSVARYTTTADNRLGNLFWVDGIMKSDYELFGDVLAFDATYRGNKVMKDYRNNEVTAQFYSTYYTPVLSTGLDAIELSASKLYTRAVFREVKKQIKGVATLLFQGRESISTTIVYSFSKMGRPDRALCKIAKDCTTLKMGNDSRDQARLLRYSALYSALSHVVTLGCEEVEDFALAQDAIANLVDILQRRRVEKDGNKVLPNNKCGVKDPTMAATKGAPKRRKANLCASEEEPKPKRRCCTKCGVPGHTRRTCAGHDAKAVPEGSEAPSSAFAESSFANGQKVTSSRSQGGAPLGMAPTQSNVSRFAPSGGGGNIFLGGQRIDHFYATPTCGPMSSAPCYSPSFVPGVIHSGPHGASTSLGSEAIERWILEVTL 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01167 618 ProSiteProfiles Zinc finger CCHC-type profile. 484 497 IPR001878 GO:0003676|GO:0008270
Adu10g01167 618 MobiDBLite consensus disorder prediction 1 42 - -
Adu10g01167 618 Pfam FAR1 DNA-binding domain 69 156 IPR004330 -
Adu10g01167 618 MobiDBLite consensus disorder prediction 447 473 - -
Adu10g01167 618 MobiDBLite consensus disorder prediction 513 551 - -
Adu10g01167 618 MobiDBLite consensus disorder prediction 1 28 - -
Adu10g01167 618 MobiDBLite consensus disorder prediction 503 551 - -
Adu10g01167 618 PANTHER OS02G0262500 PROTEIN 53 289 - -
Adu10g01167 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 289 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01167 Adu-Chr10 25195402 25198077 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g01167 FAR1 5.1e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01167 - - ahf:112776551 676.011