Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01131 ATGATGTATATTCTTAGTGATGTCATCAATGCTTATGGAGATAAGAATTCCAAATTGGGTATGCATGATGTGAACAAGTATGCATTGAGGCTTTTATTAGTTGCAATTGGTGTTGGACTTTCAGCTTTTGTAGAAGGAATGTGTTGGGCAAGAACTGCAGAGAGACAGGCTTCAAGAATGAGAATGGAATATTTGAAATCAGTGCTGAGACAAGAAATTGGATTCTTTGATAGCCAGACAGCTGGTACTTCAACAACTTACCAAGTTGTCTCACTCATCTCCTCAGATGCCAATACCATCCAAGTTGCCTTGTGTGAGAAGTGTGAATCAAAAGACTCATCAGAAGATAACATAGAACTGCAAGCAAAGGGTCCAAAGCTAGAGATAGGTTCACCTATTATTTTTACAGAGGCTCCTAAAATGATTAAGACTGCTGCTTCTGTTCCATGTTTTGGGGTTAATTCTGGTTTGGTCAAGCCTGGTGATGTTGGAAGGGGGGACAAATCCGTGGGGGACAAATCCGTGGAGTTAGAGGCTGTTCTCAAAGAAACTGTGAATTTGGAGAACATACCTATTGAGGAGGTTTTTGAGAACCTGAGATGTAGTAGAGAAGGTCTCAGCAGCAAGGCTGCTGAGGAAAGACTCGCCATTTTTGGCCACAACAAGCCTTATTTTACAGATAATGCTGCTGCAGCTCTCATGGCTCGTCTCGCTCCAAAAGCAAAGGTGTGTCAAAAGTACAAGTCTCCTGGGAATGCTTTTGTTGAAGGCGATGCTTCTAGTGCCAGCTACTTCCTCGCAGGTGCAGCTGTTACCGGTGGGACTATCACAGTTGTAGGCTGCGGCACAAGTAGTTTACAGAATCATCCTGCTATTGTTGTGCCTAGGCTTCCTACTGGTTTGAATTTGTTTAGCCTAGTCAGGAGATGTCAAGATTAA 939 0.4302 MMYILSDVINAYGDKNSKLGMHDVNKYALRLLLVAIGVGLSAFVEGMCWARTAERQASRMRMEYLKSVLRQEIGFFDSQTAGTSTTYQVVSLISSDANTIQVALCEKCESKDSSEDNIELQAKGPKLEIGSPIIFTEAPKMIKTAASVPCFGVNSGLVKPGDVGRGDKSVGDKSVELEAVLKETVNLENIPIEEVFENLRCSREGLSSKAAEERLAIFGHNKPYFTDNAAAALMARLAPKAKVCQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVVGCGTSSLQNHPAIVVPRLPTGLNLFSLVRRCQD 312
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01131 312 SUPERFAMILY ABC transporter transmembrane region 2 104 IPR036640 GO:0005524|GO:0016021
Adu10g01131 312 Gene3D ABC transporter type 1, transmembrane domain 1 112 IPR036640 GO:0005524|GO:0016021
Adu10g01131 312 SUPERFAMILY EPT/RTPC-like 245 290 IPR013792 GO:0003824
Adu10g01131 312 Gene3D Enolpyruvate transferase domain 240 297 IPR036968 GO:0016765
Adu10g01131 312 Pfam Cation transporter/ATPase, N-terminus 189 222 IPR004014 -
Adu10g01131 312 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 108 - -
Adu10g01131 312 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 246 287 IPR001986 GO:0016765
Adu10g01131 312 Pfam ABC transporter transmembrane region 2 104 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g01131 312 Pfam Protein of unknown function (DUF3148) 129 165 IPR021495 GO:0010258
Adu10g01131 312 SUPERFAMILY Calcium ATPase, transmembrane domain M 186 223 IPR023298 -
Adu10g01131 312 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 104 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g01131 312 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 108 IPR039421 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu10g01131 Adu-Chr10 23600970 23604169 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01131 170 222 Primary Pumps ATPases AT5G62670 77.358 6.21e-21 91.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01131 K05658 - adu:107469479 210.69