Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01128 ATGACACCACTTTCCTCCTCCGAAATCCTTCGTCTCTCCGCCGCGGTGATATTCACGCTCTCTCTACTGATCCCCACTTCCCATGCTCTCGGCTCCGGCGCTACCCTTGCCGTCACCGACGCCTCCGACACCGTCTGCGGCGTCGTCGCGGGGGAATCCACCCAACGCATTGAGTGCTCCCGCCTCGGTAGTCAGCTTGTCCCCGCCGTTCCCCCTAACATCTCATTCTCCACCGTCTCCGGCGGCGCCACCTTCTTCTGCGGCCTCAGGTCCGGCAACCGCACCTTGCTCTGTTGGAACACCATCACCACCACCAACGGAACCTTCACACCAAAGAGACTCTACAACAACGACACTGTTCTATTGGAGAATCTCGCCGTCGGAGAAACCCACGTTTGCGCCACCGTGGTCGGCGCCGGAACCGTTACGTGCTGGAGAACCAGCAAAACGTTCAAGTCCCCATCTAGGTCTCTTCAATTCTCTTCAATCTCATCTGGGTCAGGATTCTCTTGCGGGATTCTGAAGAACAGTTCTCAAGTTCGATGTTGGGGTGAAACGGTAATTTCAAGAGTGATTGAAAATGGGTTTAAGAACATGTCTATGTGGAGCATTGTCGCTGGTGGTTCACACGTTTGTGGGTTGAATTCAACTGGATTTCTGGTTTGCATAGGGGACAACGACAATTTTGGGCAACTTGATGTTCCAAAAAATGAAGCTTGGGAATTTGGTGAATTAGCACTTGGTGCTAGCCATGGATGTGCTTTGAGAAGGTTGAATGGAACTGGAAGCGTTGTTTGTTGGGGTGGTGATGGTAATTTCACATCGGAAGTAACAAAAGGTGTTTCCTTCGAGGTAATTGTTTCTGGGTCTAACTTCACTTGTGGATTAGTGACACGTAATCTTAGTGTTCTTTGTTGGGGTCCTGGTTGGCCTAATAATAATGGTTCAAGATTTGAACTTCCATTGCCTAGTGTTCTTCCGGGTCCTTGTGTTCAATCCTCTTGTGATAATTGTGGTCCATATCCTGATTCTCAATCTCTGTGTTCCGATTCTGATAGCAACATTTGCAAGCCTTGTTGGCCTCCAATTCAAGCTCCACCAGCGGCAACGGTTCCATCTTCGCTGCCGCCGGGGCCTGCTCCTCGGCAGAGGTCGCGGTCGAGGACATTGACTAGGGGTTTATTGGCATTTGCTATTGTTGGATCAGTTGGTGCTGTTGCTGGAATTTGCACAATTGTTTATTGTTTGTGGAATGGTGTTTGTTTTGGGAAGAAGAAAGTGCACAATTCTGTGCAGCCAACAATCACAAGAGGTAGTAGTACTTCAAGTGGTGTTTCCAACAATAGTAGGAACAATAGCAGGCCTCTTTCGAGGACTTCCACGATTATGCGACAAGGTTCGAGGATAATGCGCCGCCAGAGGAGTGGCACCTCATCCACAAAACACCCTGATAGGGCTGAGGAATTCGCCTTGGCCGAGCTAATAGCTGCAACGGACAATTTCTCGCCTGAGAACAAGATTGGGGCTGGAAGCTTTGGAGTTGTGTACAGGGGAAAGCTTGTGGACGGCCGTGAGGTGGCGATCAAGAGGGGCGAAACTGGCTCTAAATTGAAGAAGTTTCAAGAGAAAGAAAGCGCGTTTCAGTCCGAATTGTCCTTTTTGTCGCGGCTACACCACAAGCACTTGGTTAGGCTAGTTGGTTTCTGTGAGGAGAAAGAGGAGAGGCTCTTGGTTTATGATTACATGAAGAATGGTGCATTGTATGATCATTTGCACGCCAAGAACAATGTGGAGAAGAGTAGCAGTGTCTTGAATTCGTGGAAAATGAGGATCAAAATCGCCTTGGACGCCTCTCGGGGGATAGAATATCTCCACAATTATGCGGTTCCATCCATAAtccatagagatatcaagtcttccaacatcctcctcgatgcaaattggactgctagagtatccgattttggattGTCTTTGATGAGTCCAGAGCCAGACCGTGATCATCGGCCGATGAAGGCAGCTGGAACGGTTGGATATATTGATCCTGAGTACTATGGCCTAAATGTGATAACGGCAAAGAGTGATGTCTACGGCTTTGGAGTAGTTCTTTTAGAACTATTAACCGGAAAGCGAGCGATATTCAAGAATGGCGAAGATGGCGACACACCAATGAGTGTGGTGGACTTCGCCGTGCCTGCAATTTTGAGTGAGGAATTGGCGAAGATTTTGGACCCTAGGGTTGGACCACCAGATGCAAATGAAGCTGAGGCAGTGGAATTGATGGCAAAGATTGCAATGCTTTGTGTGAATTTGGAAGGAAAAGATAGACCAACCATTTCTGATATTGTTACCAATTTAGAGCGTGCATTGCTTCTTTGTGAAGGTTCTCATCATCATGATAGCAATTCGAGTGGTATAATCTCCATTGTCTCAGATTGA 2439 0.4686 MTPLSSSEILRLSAAVIFTLSLLIPTSHALGSGATLAVTDASDTVCGVVAGESTQRIECSRLGSQLVPAVPPNISFSTVSGGATFFCGLRSGNRTLLCWNTITTTNGTFTPKRLYNNDTVLLENLAVGETHVCATVVGAGTVTCWRTSKTFKSPSRSLQFSSISSGSGFSCGILKNSSQVRCWGETVISRVIENGFKNMSMWSIVAGGSHVCGLNSTGFLVCIGDNDNFGQLDVPKNEAWEFGELALGASHGCALRRLNGTGSVVCWGGDGNFTSEVTKGVSFEVIVSGSNFTCGLVTRNLSVLCWGPGWPNNNGSRFELPLPSVLPGPCVQSSCDNCGPYPDSQSLCSDSDSNICKPCWPPIQAPPAATVPSSLPPGPAPRQRSRSRTLTRGLLAFAIVGSVGAVAGICTIVYCLWNGVCFGKKKVHNSVQPTITRGSSTSSGVSNNSRNNSRPLSRTSTIMRQGSRIMRRQRSGTSSTKHPDRAEEFALAELIAATDNFSPENKIGAGSFGVVYRGKLVDGREVAIKRGETGSKLKKFQEKESAFQSELSFLSRLHHKHLVRLVGFCEEKEERLLVYDYMKNGALYDHLHAKNNVEKSSSVLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSLMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVITAKSDVYGFGVVLLELLTGKRAIFKNGEDGDTPMSVVDFAVPAILSEELAKILDPRVGPPDANEAEAVELMAKIAMLCVNLEGKDRPTISDIVTNLERALLLCEGSHHHDSNSSGIISIVSD 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01128 812 SUPERFAMILY RCC1/BLIP-II 67 309 IPR009091 -
Adu10g01128 812 Gene3D Phosphorylase Kinase; domain 1 462 581 - -
Adu10g01128 812 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 803 IPR044815 GO:0004674
Adu10g01128 812 SUPERFAMILY Protein kinase-like (PK-like) 479 786 IPR011009 -
Adu10g01128 812 MobiDBLite consensus disorder prediction 433 483 - -
Adu10g01128 812 Gene3D - 199 351 IPR009091 -
Adu10g01128 812 Gene3D - 24 198 IPR009091 -
Adu10g01128 812 ProSiteProfiles Protein kinase domain profile. 501 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01128 812 Gene3D Transferase(Phosphotransferase) domain 1 582 803 - -
Adu10g01128 812 CDD STKc_IRAK 507 788 - -
Adu10g01128 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Adu10g01128 812 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 803 - -
Adu10g01128 812 MobiDBLite consensus disorder prediction 433 476 - -
Adu10g01128 812 Pfam Protein kinase domain 503 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01128 812 SMART serkin_6 501 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g01128 812 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01128 Adu-Chr10 23388074 23390568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01128 4 812 Receptor kinase-like Gene Family AT3G55950 58.633 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Adu10g01128 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01128 - - gmx:100786639 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01128 10 23388074 23390568 Adu07g00786 07 9451319 9453769 PCT