Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01117 ATGATATTGTTCAACGTTGCAAATCCCACCAATGGATGCCAAAAGAAGCTCGAGATTGATGATGACCAGAAGCTGCGAGCATTTTGGGATAAGAGAATCTCACAAGAGGTTCTTGGTGATGCTTGGGTTGAGGGATTTCTAATGAAGCAGGGAGTATTGACCCCCGGTTGCGTTCGCCTCTTGCTCTATAGAGCGCCGAAAACTCCTCCTCCCACCCTCCACAGCACCGTCCTTCTCTCTGCGTTTGACGTCGCCGGACAGCACCCTCGCAGCGGCCTTCCCTTATCGCACTTCCCTCTTCTCGGCGTGGTTCTTTCTCTCCCTCCCTTCCTTGTCACGCTTCCTTCTCCTTGTCGCACACTAACCCTCAGTCAGAGAGTGAGCCCAGACCCTAGAGCTCCCCTCCCTTTCCCCTACACAGCGTCGTCTCCGATATTGCAGCCCTGTCTTCGACATAATAGGTCGCAAGTTGCTGACTGCAGTGCCGTAATCGTCCTCCACTACTCTGACATACGTCTCAGTCCAGTCCAGGAGTGTCGTCGTCCATCTCAGTCCAGTCTCGTCGCCCCCATAGCAGCCGCCAACCTGCCGTGTCTCACTGTCCAGCATTTCCATCTTCCTTTTTTGTAG 630 0.5381 MILFNVANPTNGCQKKLEIDDDQKLRAFWDKRISQEVLGDAWVEGFLMKQGVLTPGCVRLLLYRAPKTPPPTLHSTVLLSAFDVAGQHPRSGLPLSHFPLLGVVLSLPPFLVTLPSPCRTLTLSQRVSPDPRAPLPFPYTASSPILQPCLRHNRSQVADCSAVIVLHYSDIRLSPVQECRRPSQSSLVAPIAAANLPCLTVQHFHLPFL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01117 209 SMART Ribosomal_S6e_2 2 95 IPR001377 GO:0003735|GO:0005840|GO:0006412
Adu10g01117 209 PANTHER 40S RIBOSOMAL PROTEIN S6 3 65 IPR001377 GO:0003735|GO:0005840|GO:0006412
Adu10g01117 209 Pfam Ribosomal protein S6e 4 41 IPR001377 GO:0003735|GO:0005840|GO:0006412
Adu10g01117 209 PANTHER 40S RIBOSOMAL PROTEIN S6 3 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01117 Adu-Chr10 22276655 22279055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01117 2 65 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 65.000 3.09e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01117 K02991 - gmx:100819697 98.2117