Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01108 ATGGCCTCTTGGTTGGATAATGGTGACAAGATGAATGGAGTTTCGCATACTAATCCTTCTAGAGATCAAAACAAAAGAAAGAAGCAATCATCATTCATCAACGATGGTAATGGTGGATGCAAGTGTAAAAAGAGTCAATGCATGAAGCTCTATTGTGAATGCTTCCATACTGAAAATTTATGCAACAAGGATTCTTGTACTTGCCAAGATTGTCAGAATAACGTAAAGCATAGGGAGCATGTGAATGAGACAAAGAAGGAAATAAAGTTGCGTGATTCACACGCCTTTGAACCTAAGATTGTTGTTGACAACGTGGTGATAAACCCCatttgcctttaa 339 0.3717 MASWLDNGDKMNGVSHTNPSRDQNKRKKQSSFINDGNGGCKCKKSQCMKLYCECFHTENLCNKDSCTCQDCQNNVKHREHVNETKKEIKLRDSHAFEPKIVVDNVVINPICL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01108 112 ProSiteProfiles CRC domain profile. 36 112 IPR005172 -
Adu10g01108 112 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 15 102 IPR044522 GO:0003700
Adu10g01108 112 MobiDBLite consensus disorder prediction 1 39 - -
Adu10g01108 112 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 39 74 IPR005172 -
Adu10g01108 112 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 15 102 - -
Adu10g01108 112 SMART CXC_2 35 77 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01108 Adu-Chr10 21947913 21948251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01108 40 101 CPP Transcription Factor Family AT3G04850 48.387 3.88e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Adu10g01108 TCR 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01108 K21776 - ahf:112771246 92.4337