Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01085 ATGAAGGGATATGAGCCTCGTTCAAGTTCTTCTTGTGCAGCCTGCAAATTACTCAAGAGAAGATGCATCCCCAACTGCATCTTCGCGCCGTATTTTCGCTCCGATGAGTGCAAGAAATTCGCGAAAGTTCACAAGGTGTTCGGAGCAAGCAATGTGAGCAAGATCCTCATTGAGGTCCCTGAAGAGCAAAGAGAGGACACGGTGAATTCTCTCGCTTATGAGGCCGAAGCCAGGCTCCGCGACCCAGTTTATGGATGCATTGGCGCCATAGCGCTCCTTCAGAGGAAGATGGTAGAGTTACAACACGATCTGGCGATAGCTAAAGATCGCCTGGCTCGTGTTGTAGCTTCTACTACATCTGCCTCTGAGTCTGCTTTGGTCGCTACTACTACTTTTAGTAGTAGCGATGAAATTATGCATGGTTCTTCTTCTTATTCCCATGTTAGCTTGCCCCCTTTTCCTTGCAGTGATTTCAGTGATAGCTTCTGCCATAGCTCTTCTTCTTCATCTCAATTCTTGAGCCGACATGATCAAGCGGTTGATGATTTCACTCAAATCCCATACATATTTTAA 573 0.4642 MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARVVASTTSASESALVATTTFSSSDEIMHGSSSYSHVSLPPFPCSDFSDSFCHSSSSSSQFLSRHDQAVDDFTQIPYIF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01085 190 Coils Coil 90 110 - -
Adu10g01085 190 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Adu10g01085 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 163 - -
Adu10g01085 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 163 - -
Adu10g01085 190 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01085 Adu-Chr10 20891061 20892074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01085 1 111 AS2 family AT3G11090 81.081 1.19e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu10g01085 LOB 1.6e-37 No_clan