Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01078 ATGCTCAGAGGAGTCTCAATGCACAACATAAACAGACGTCTTAACATGATGAACAAAAACAGAGAGATATCCCTTTGTGGACTGAAAATGAGGGCTGTTCAGCTTTCAACAGATCACAGCACAAGTATTGAAGAGGAAGTGTTTAGAATAAGAGCAGAACACCCAGATGATAATCAAGCCATATTGAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCCGGATTCCTGAAGAGGTTTAACTTCCTTGGTAAAGATTCTATCAAGTATGAGAATACAATTGAGGTTGAGCTTCCTGTTTACGATGCAATTTTGAAGTTCCAAAAAGATAAGCGCCCCGGTGATGATCTTTTTGACAAGTTGGATACAAGTAAATTAAATGCTCATCTGAAGGAACTCATGCCTGGCCTAACTGCAAAGGTCTTCCGTACATTCAATGCATCTATCACGTTGGATGATATGTTGAATAAGGAAACTAAAGAGGGTGATGTTGTCGAAAAGATTCTTGTTTATCAACATGCAAATAAACAGGTTGCAATCATTTGTAATCATCAACGCAGTGTTTCAAAATCTCACTTGTCACAAATTGAAAAGTTAACAAACAAGATTGGTGAGCTTCAGGATGTTCTGAAGGAGCTAAAGACAGATTTGGACAGAGCAAGGAAAGGAAGGTCCCCTCTAAAGGGTTCAGATGGAAAGACAAAAAGGAACTTGGCCCCTGAAGCGCTAGAGAAAAGATCTCTCAAACCAATGCAAAGATTGAGAAAATGGAACATAAACTATCTTGACCCTAGGATTACAGTTGCCTGGTGCAAACGGAATGAGGTTCCCATTGAAAAGGTTATTGTAGGAGAGATCAAGCACTCCCAAGCTGCTCATGTCACCAACTTGTGGAGGGACTTTTCCAAAAACGGTCATGGAAGTGGTCTCGATTGGAGGGGGTCGCCTGGCACCTCCGAGAAATTTATGTGCTTAGCCTGCTCAGGAGACAACCCCCCGTCGCTCATGGCTCGTGCACTCTCTCGTCTCTTCCTCTGTGCCAAGGAAGCCAAGGAAGCTTCCATCCTCAGCTCGCATTTTTTTTGGGGCTATATATCTAGTTTATAG 1119 0.4209 MLRGVSMHNINRRLNMMNKNREISLCGLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAILNDRVKGQLKVTRAFGAGFLKRFNFLGKDSIKYENTIEVELPVYDAILKFQKDKRPGDDLFDKLDTSKLNAHLKELMPGLTAKVFRTFNASITLDDMLNKETKEGDVVEKILVYQHANKQVAIICNHQRSVSKSHLSQIEKLTNKIGELQDVLKELKTDLDRARKGRSPLKGSDGKTKRNLAPEALEKRSLKPMQRLRKWNINYLDPRITVAWCKRNEVPIEKVIVGEIKHSQAAHVTNLWRDFSKNGHGSGLDWRGSPGTSEKFMCLACSGDNPPSLMARALSRLFLCAKEAKEASILSSHFFWGYISSL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01078 372 SUPERFAMILY PP2C-like 31 83 IPR036457 -
Adu10g01078 372 Pfam Eukaryotic DNA topoisomerase I, catalytic core 24 220 IPR013500 GO:0003677|GO:0003917|GO:0006265
Adu10g01078 372 Pfam C-terminal topoisomerase domain 262 285 IPR025834 -
Adu10g01078 372 MobiDBLite consensus disorder prediction 224 249 - -
Adu10g01078 372 Gene3D Topoisomerase I; Chain A, domain 3 15 143 IPR014711 GO:0003677|GO:0003917|GO:0006265
Adu10g01078 372 Pfam Protein phosphatase 2C 25 84 IPR001932 -
Adu10g01078 372 Gene3D - 144 292 IPR014727 GO:0003677|GO:0003917|GO:0005694|GO:0006265
Adu10g01078 372 PANTHER DNA TOPOISOMERASE 1 ALPHA 83 287 - -
Adu10g01078 372 PANTHER DNA TOPOISOMERASE I 83 287 - -
Adu10g01078 372 SMART topeu 47 279 IPR013499 GO:0003677|GO:0003917|GO:0005694|GO:0006265
Adu10g01078 372 Coils Coil 200 227 - -
Adu10g01078 372 SUPERFAMILY DNA breaking-rejoining enzymes 83 290 IPR011010 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01078 Adu-Chr10 20629143 20634012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01078 7 86 PP2C-type Phosphatase Gene Family AT2G46920 67.500 2.99e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01078 K03163 - gmx:100779575 326.635