Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01070 ATGGGTCCGAACCTAGAGTGCCGTATGTACGAGGCGAAGTACCCGGAGGTGGACATGGCGGTGATGATTCAGGTGAAGAACATCGCCGACATGGGCGCGTACGTTTCACTCCTCGAGTACAACAACATCGAGGGAATGATCCTCTTCTCTGAGCTCTCCCGGCGCCGGATTCGGAGCGTCAGCAGCCTCATCAAGGTCGGTCGCATCGAACCCGTTATGGTGCTTCGTGTCGATAAGGACAAGGGTTACATCGACCTTAGCAAGCGCCGTGTTTCTGAAGAGGATATTCAGGCCTGTGAGGAGAGGTATAATAAGAGCAAGCTTGTTCACTCTATCATGCGCCACGTTGCTGAGACCCTAAACATTGATTTGGAGGAGCTGTATGTTCACATTGGATGGCCTTTATACCGCAAATATGGTCATGCTTTTGAGGCATTCAAGATAATTGTGACGGATCCTGATTCAGTGCTAAATGCCCTCACCCGTGAAATCAAGGAAGCTGGCCCTGATGGGCAAGAGGTTGTTCCAGCTGTCACAGAAGAAGTGAAGGATTCTCTAGTAAAGAATATTAGAAGACGAATGACTCCCCAGCCCCTGAAAATTAGGGCAGATATTGAAATGAAATGTTTTCAATTTGATGGTGTTCTTCACATCAAGGAGGCCATGAGGAAGGCTGAAGCTGCTGGAAATGATGACTGCCCTGTAAAAATTAAACTTGTTGCGCCCCCACTTTATGTGCTTACCACTCAGACTCTCGACAAGGAGCAAGGGATACAAGTCCTCAATAATGCCATTACTTCTTGCACCGAGTCAATAGAGAAACACAAGGGTAAACTTGTGGTGAAGGAGGCACCTAGAGCGGTGAGCGAACGCGATGATAAATTGCTTGCTGAGCACATGGCAAAACTACGACAAGATAATGAAGAAGTCAGCGGCGACGAGGACAGCGAAGAGGAAGAGGACACAGGAATGGGTGACGTCGATCTGGATAACAACGGCACCGGAATCACAGAGTGA 1017 0.4867 MGPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKDKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLNIDLEELYVHIGWPLYRKYGHAFEAFKIIVTDPDSVLNALTREIKEAGPDGQEVVPAVTEEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTLDKEQGIQVLNNAITSCTESIEKHKGKLVVKEAPRAVSERDDKLLAEHMAKLRQDNEEVSGDEDSEEEEDTGMGDVDLDNNGTGITE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01070 338 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 193 IPR024054 -
Adu10g01070 338 SUPERFAMILY eIF-2-alpha, C-terminal domain 197 313 IPR024055 -
Adu10g01070 338 SUPERFAMILY Nucleic acid-binding proteins 7 89 IPR012340 -
Adu10g01070 338 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 254 IPR011488 GO:0003723|GO:0003743
Adu10g01070 338 PANTHER BNAC04G04870D PROTEIN 2 338 - -
Adu10g01070 338 SMART S1_6 16 89 IPR022967 -
Adu10g01070 338 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Adu10g01070 338 MobiDBLite consensus disorder prediction 310 326 - -
Adu10g01070 338 SUPERFAMILY eIF2alpha middle domain-like 91 193 IPR024054 -
Adu10g01070 338 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Adu10g01070 338 Gene3D - 3 91 IPR012340 -
Adu10g01070 338 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 2 338 IPR011488 GO:0003723|GO:0003743
Adu10g01070 338 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Adu10g01070 338 MobiDBLite consensus disorder prediction 297 338 - -
Adu10g01070 338 Gene3D EIF_2_alpha 199 321 IPR024055 -
Adu10g01070 338 Coils Coil 300 320 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01070 2 338 Eukaryotic Initiation Factors Gene Family AT5G05470 79.472 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01070 K03237 - gmx:100815696 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01070 10 20289312 20292797 Adu10g01070 10 20289312 20292797 ECH