Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01067 ATGGGAAGTGGAAACTCGCCATGTGCTTCATGCAAGCTTCTTAGACGGAGGTGTGCCAAGGATTGCATCTTCGCACCTTATTTCCCTTCCGATGACCCTCAAAAGTTCGCCATTGTTCACAAGGTCTTTGGTGCTAGCAACGTTAGCAAAATGTTACAGGAGCTTCCGATTCATCAAAGAGCAGATGCAGTGAGTAGCTTGGTATACGAAGCGAACGCAAGGGTTCGTGACCCGGTGTATGGATGCGTGGGAGCCATATCATACCTTCAGAACCAAGTCTCAGAGCTTCAAATGCAGCTTGCTGTTGCGCAGGCAGAGATACTCTGCATCCAGATGCAGCATGAACCCTCTGTAGCCGCAGCAATACCCAATCCACAACAAATAATGGAGTTTCAAGAACAGAACAATAATAATAATGAACTCACTCACCATCACCATCACCATCATCAGTACCTTAACTTTGCAGCAGCTTCTTCTAGCAATGTAATCCATGATTCTCTCTCTAGAGAGACTTTCTTTGGACATGACATGGTTTCTTAA 540 0.4556 MGSGNSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPIHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEPSVAAAIPNPQQIMEFQEQNNNNNELTHHHHHHHQYLNFAAASSSNVIHDSLSRETFFGHDMVS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01067 179 Coils Coil 86 106 - -
Adu10g01067 179 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Adu10g01067 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 153 - -
Adu10g01067 179 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 153 - -
Adu10g01067 179 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01067 Adu-Chr10 20018814 20019788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01067 2 118 AS2 family AT2G30130 90.598 2.57e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu10g01067 LOB 1.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01067 - - rcu:8272084 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01067 10 20018814 20019788 Adu07g00746 07 8714285 8715502 ECH
Adu10g01067 10 20018814 20019788 Adu10g01067 10 20018814 20019788 ECH
Adu10g01067 10 20018814 20019788 Adu07g00746 07 8714285 8715502 PCT