Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01048 ATGCATTCAAACCCTAATTTACTCGAACCCTGTTTCCCCTTCCCTTTCATTTCGACTGCGCTGCGCCTCCCCACCCATCCAAAAACTCCCTCTCCTCAGTCCTTACCGTCCACCGTTGTTTGCGCCGTCACGCCGGAGGCCGGACGGATCCCTCGCCTAACTACTCCTCGTGGTTCCTCACTACTGCTCGTGGTTTATCGCCGCTCGCCACCTCGTTCTTCCCCACGCCGGAGAAATCGACGCTACACGCTGTTCCTCGCCTTTGGTCTGCGTTCCTCGCCTCTGTTCTCCGCTTCCTCTTACAAGGTTTCAACAATGGTTAGAAAAAAGTCAGAGGATGCAGGCCCATCTGCAAAGACGAAGGCAAGTAGCAAAGATGCCCCTAAGAAGGAAAAAATTTCCATCTCTGCCATGCTGGCCAGCATGGACGAAAAGCCTGATAAACCCAAAAAGCCCTCTTCCACTAAGCCCAAAGCAAAAGCTGCTCCAAAACCTTCTGCATATACTGATGGTATTGATCTTCCTCCATCCGACGAAGATGAAGATGAAGCTCTCTTGGAGGAGGAGGAAGAGAATGCTTCCAAACGGCATCAGAGGAGTGAATTGAAGGCACTTGAAGTATCAACCACAGACAAAGAGCTGAAGAAGCGTGAGAAGAAGGATATTTTAGCAGCTCATGCTGTTGAGCAGGCAAAGAAGGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTGGTTATTGGAAGTCGGACTTCAGTGCTTGATGGAGACGATGATGCTGATGCTAATGTCAAAGATATAACAATAGAGAATTTTTCGGTGTCTGCTCGGGGTAAAGAACTTCTGAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGACCCAATGGAAAGGGGAAGTCCACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCAGTACCTAAGAATATTGATGTCCTTCTAGTTGAGCAGGAGGTAGTTGGTGATGACAAAACAGCTCTTGAAGCTGTTGTTTCAGCTAATGAAGAACTGGTTAAAGTTCGACAAGAAGTTGCTTCTCTGCAAAATGCAACTTCTGCCGAAGGAAGTGTTGAGAAAGATAATAGTAATGAGGAAGATGATGCAGGGGAGAAGCTAGCAGAGCTGTACGAGAAACTACAACTGATGGGTTCTGATGCTGCTGAAGCTCAAGCATCAAAGATTTTAGCGGGTTTGGGTTTTACGAAGGATATGCAGGGCCGACCAACAAAATCTTTCAGTGGTGGATGGAGAATGCGAATTTCTTTGGCTCGAGCACTTTTTGTGCAGCCTACTTTATTATTGCTTGATGAACCCACAAATCACCTTGACCTGAGAGCTGTTCTCTGGTTGGAAGAGTACCTGTGCCGTTGGAAGAAGACTTTGGTTGTTGTGTCACACGATAGGGATTTCCTCAATACAGTTTGCACTGAGATTATTCATCTTCATGACTTGAAACTCCATTTCTATCGTGGAAACTTTGATGACTTTGAGAGTGGGTATGAACAGCGTCGTAAAGAGATGAACAAGAAGTATGAGATTTATGACAAGCAACTGAAAGCTGCAAAAAGGAGTGGTAACCGAGCTCAGCAAGAAAAGGTGAAGGACCGAGCAAAGTTTGTGGCAGCTAAAGAAGCATCTAAAGCCAAGGGCAAGGGCAAGGGCAAGGTTGATGAAGATGAGGCCCCACCAGAGGTTCCACAGAAGTGGAGGGACTACAGTGTTGAGTTTCACTTTCCTGAACCTACTGAGCTCACACCTCCACTTCTTCAGCTTATTGAAGTGAGCTTCAGTTATCCGAATCGTGAGGATTTCAGACTGTCAAATGTTGATGTTGGCATTGATATGGGAACTCGTGTTGCCATTGTTGGGCCCAATGGAGCTGGAAAATCTACACTACTAAACCTTCTGGCGGGTGATTTGGTTCCAACTGAGGGTGAAGTTAGGAGGAGTCAGAAGTTGCGGATAGGAAGATACTCGCAACACTTTGTGGACCTTCTAACTATGGACGAAACCCCTGTTCAGTATCTTCTTCGTCTCCATCCAGACCAGGAGGGACTTAGCAAGCAAGAGGCTGTCCGTGCAAAACTCGGTAAGTTTGGGCTACCTAGTCATAACCATCTCACCCCTATTGCCAAACTATCAGGAGGGCAGAAGGCCAGGGTTGTCTTCACCTCAATATCCATGTCAAGACCCCATATTTTGTTGTTGGATGAACCCACTAATCATCTAGACATGCAAAGTATTGACGCATTGGCGGATGCACTAGACGAGTTCACTGGTGGAGTTGTTCTCGTTAGTCATGACTCGAGATTGATATCTCGTGTATGTGAGGATGAAGAGAGGAGTCAAATCTGGGTTGTCGAGGATGGTACTGTAAGGACTTCGGTTGGAACATTCGATGATTACAAGAACGAGTTGATGAAAGAAATCAAAGCTGAAGTTGATGACTGA 2490 0.4627 MHSNPNLLEPCFPFPFISTALRLPTHPKTPSPQSLPSTVVCAVTPEAGRIPRLTTPRGSSLLLVVYRRSPPRSSPRRRNRRYTLFLAFGLRSSPLFSASSYKVSTMVRKKSEDAGPSAKTKASSKDAPKKEKISISAMLASMDEKPDKPKKPSSTKPKAKAAPKPSAYTDGIDLPPSDEDEDEALLEEEEENASKRHQRSELKALEVSTTDKELKKREKKDILAAHAVEQAKKEALKDDHDAFTVVIGSRTSVLDGDDDADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKVRQEVASLQNATSAEGSVEKDNSNEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKAAKRSGNRAQQEKVKDRAKFVAAKEASKAKGKGKGKVDEDEAPPEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVRTSVGTFDDYKNELMKEIKAEVDD 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01048 829 CDD ABCF_EF-3 602 804 - -
Adu10g01048 829 CDD ABCF_EF-3 267 498 - -
Adu10g01048 829 MobiDBLite consensus disorder prediction 362 381 - -
Adu10g01048 829 Coils Coil 343 363 - -
Adu10g01048 829 Pfam ABC transporter 282 453 IPR003439 GO:0005524
Adu10g01048 829 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 267 528 IPR003439 GO:0005524
Adu10g01048 829 MobiDBLite consensus disorder prediction 556 577 - -
Adu10g01048 829 Coils Coil 517 537 - -
Adu10g01048 829 ProSitePatterns ABC transporters family signature. 425 439 IPR017871 GO:0005524
Adu10g01048 829 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 827 IPR003439 GO:0005524
Adu10g01048 829 Gene3D - 568 829 IPR027417 -
Adu10g01048 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 523 IPR027417 -
Adu10g01048 829 SMART AAA_5 291 497 IPR003593 -
Adu10g01048 829 SMART AAA_5 628 804 IPR003593 -
Adu10g01048 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 581 816 IPR027417 -
Adu10g01048 829 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 110 829 - -
Adu10g01048 829 PANTHER - 110 829 - -
Adu10g01048 829 MobiDBLite consensus disorder prediction 174 188 - -
Adu10g01048 829 Gene3D - 264 549 IPR027417 -
Adu10g01048 829 MobiDBLite consensus disorder prediction 189 213 - -
Adu10g01048 829 Pfam ABC transporter 619 754 IPR003439 GO:0005524
Adu10g01048 829 Coils Coil 185 205 - -
Adu10g01048 829 MobiDBLite consensus disorder prediction 107 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01048 Adu-Chr10 18983353 18987014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01048 601 814 Calmodulin-binding Proteins AT2G36910 29.167 1.12e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01048 K06184 - gmx:100806865 1195.65