Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01034 ATGACCCATTTCATTGTGGTCGACAAGAAGGAAAAAACCAAGACAACCAACAATAGATGGTCCTTAAGTTTTTCACATAGGACCACGGTTCAGCCAGTTTCTAAACCAAGTTATCCTCTTGAAGCATTTAGCTTTAAGCCCATTCCGGAGTTGCTTGCTGCTGACAAGCTGGAAGATTCAGTTCTAATCGATGTCATAGGGGAAGTGGTTGGCAAAGAGGATCCAAGAGAACTCATAACTAGCAAAGAAAGAGAGGCTAAAAGATTGGCTGTCATTCTTGAGGACCTTGAAAACAATAGTATTGGTTGTGTGTTGTTTGGAGACATGATTGATCAGATACTTCCATATCTTGAAGAAGGGAGGGTTGAGCCATTGATAGTTATAGCACAGTTTTTTAAACCCAGTAGGTGGAACGGAAAAACGTCAGTGCAGAGTCATTTTGATGTCTCAAAATTACGTATTAACCCTGATTTGGATGAGGTTAAAGATTTTCGTAACAGGAGGCTTTCTGAAAAGCCGTCTAACTCTACCAGGATAAGTCAAGTTACATCGCATGGTCCACGATCTGGTGCAGACGAAATAAAAAATGGAGACGTCGTGGTCAAGACAATAGAAGAAGCCCTAAGCTCTTCACAGGAAGGACCTATATGGATTGCTGGTACTATTGTTTCAATTAATGCTGGAAAGGATGATTGGTTCTATAAATCGTGTCGAAAGTGTCCGAAGAAAGTAGAAACTCCAATTGGCAACAGATATGAGTGTGGCAAGTGTGGCCACACTCATGCAAGTGCATCAGTTAGGTTTAAGGTTGAGGTATTAGTATATGATGGAACTGGGAGCATCATGTTGCTGATGTGGGATAGGGAGACGGCGCAGCTGTGTGGAAGGCAAGCTGAGCAGATCAAGGATGAGGAAAGTAGTGATGGAGAAGGTTATCCTCCTACATTGGATAGCATGATGGGTAGGCGGTTACTCTTCAAAATAAATGTCAAAGCATCGAACATGAAGCAATATGACCATGTTTACACGGTGATGAAAATATGTGATGATGAAGATATTGTGGAGATGAATCACCCCAAACCAGTACAAAACAATGCTTCTGCTAATCTAATTGAGACCGGGTGCAGTGACTCGATTGGTATATCAGCAGTGGTGGTTAATATGCATAATGATACTAAATCTATGGTATCTTTGGACGGTATCGAAGACAGTGTCACAAGCCTGAAGTCCAAAACACCTGCAAAAAGAGCTCCCATGGGGCTAAAGCAGTCCGTGCATGTTAATATTGACACTGAAGATGAGTTTGGTTTTTCAACAAACAAATTTAGCCGAAAAACGGGCAAGAGGCAGAGGATTCAAATAAATGAGAGTGATAACTGA 1380 0.4159 MTHFIVVDKKEKTKTTNNRWSLSFSHRTTVQPVSKPSYPLEAFSFKPIPELLAADKLEDSVLIDVIGEVVGKEDPRELITSKEREAKRLAVILEDLENNSIGCVLFGDMIDQILPYLEEGRVEPLIVIAQFFKPSRWNGKTSVQSHFDVSKLRINPDLDEVKDFRNRRLSEKPSNSTRISQVTSHGPRSGADEIKNGDVVVKTIEEALSSSQEGPIWIAGTIVSINAGKDDWFYKSCRKCPKKVETPIGNRYECGKCGHTHASASVRFKVEVLVYDGTGSIMLLMWDRETAQLCGRQAEQIKDEESSDGEGYPPTLDSMMGRRLLFKINVKASNMKQYDHVYTVMKICDDEDIVEMNHPKPVQNNASANLIETGCSDSIGISAVVVNMHNDTKSMVSLDGIEDSVTSLKSKTPAKRAPMGLKQSVHVNIDTEDEFGFSTNKFSRKTGKRQRIQINESDN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01034 459 Coils Coil 79 99 - -
Adu10g01034 459 PANTHER REPLICATION FACTOR A 1, RFA1 27 361 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu10g01034 459 MobiDBLite consensus disorder prediction 173 187 - -
Adu10g01034 459 CDD RPA1_DBD_B_like 64 168 - -
Adu10g01034 459 Gene3D - 38 178 IPR012340 -
Adu10g01034 459 CDD RPA1_DBD_C 201 347 IPR013955 -
Adu10g01034 459 Pfam Replication factor-A C terminal domain 220 347 IPR013955 -
Adu10g01034 459 PANTHER BNAC07G49340D PROTEIN 27 361 - -
Adu10g01034 459 SUPERFAMILY Nucleic acid-binding proteins 43 168 IPR012340 -
Adu10g01034 459 SUPERFAMILY Nucleic acid-binding proteins 202 351 IPR012340 -
Adu10g01034 459 MobiDBLite consensus disorder prediction 169 190 - -
Adu10g01034 459 Gene3D - 184 357 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01034 Adu-Chr10 18516498 18518687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01034 18 301 Core DNA Replication Machinery Family AT2G06510 26.510 1.65e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01034 - - aip:107630584 644.039