Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01012 ATGATGATGCCCCACATCAATATTAGGAGGATCACAAGATTTTGGTTGATACCAACGGTACAAGATGAAGATTTATTATGTCCTGGTAATGGACTTGGTGCAGCATTTTCAACATTAATTGCAACTTTCAAAGCATTCCAACAGAAACCACCTGAACTCAAGAACGGGAGTGGTCAACTGCACCCGCCGTTCGTCGCACCCAAGGAATTCCGCTGTGGTGCTCTTATGCCTATCCCTTCCGTGCCTGTACTTGTCGATTCTGCCTGCAAGTGTCACCCGAGTGTCGTCGCAGTTATTGGGTTCTCGTGTTTCGGCTTTCTTGTCGCCGCTGGCAGAAGGAAGTCGCGGAAAATCCTGATTGCTTGCGTTTGGAGGGGAGGTCGCGGCGTCGCAGTCGCCCGTTGGCATGCTTTAAGAATTTGGCACTGTGTGGTGAATATTTTGATGGACGTTCCCGAGGCTGTTGACATTAATGCAATGTGTGAGGAGGGGGCAGGCGTGATGGGCACAGTCGATTTTGGAGATGTAGCCGATATAACGGAAAATGATATTTTGAGGAAGGTGTTTCGTAGCGAAGACGATGCATACGAGTTTTATAAGAGATTAGGAAAATTCTACGGGTTTGGTATAAGAAGGGGAGACATGTTCAAGGATGAGAAGGGTAATTTGGTTCGGAGAAGATTTTTTTGCAATAGAGAGGGACAGAGAGATAAGAAACATTATAACAGGATCGACAGGAAGAGGCCTCACAAGCCGGAGACAAGGACGAATTGTGAAGCAAGAATGTGTATATATTTAGATAAGGACAGCTCGTTGTGGAGGGTCAAGAAAATCATTTTGAACCACAATCACAACATGACTCATCCTGGAATGGTCCATCTAATTACAAGTTTTCGTTCGTTGACGGATGCTGCGAAAGCCCAATTAGATGGGTTTCAAGGTTGTGGCATCTCCACGGCAAAGACAATGCGGTACATGGCTGGGGTATCTGGAGGGTATTCATTGGTAGGTTTTTTGAAGaaagatgcttataactacgtggataagaggcgtcgtgcaaagatagttgacggagacgcaaacgcagctatagtgtacttggagggtaaagtcgatgcagacccaacttcgatggcaaggtataatgtgacagaagacgagatgctagcgaatttactgtgggcagatggtggcaacaggatagattaccaatactttggagacgtacttgcattcgactcaacctataagaagaacaaatacaagaggccgctggtgattttctcaggatgtaataaccacaagcaaacatgtatttttgggtttggtttggtgttagatgagagcattgcatcatacacgtggctgttggagaatttcttggaggtcatgtgcagcaagcagccttctgttgttgtcacagatggtgatgactcaattcgagaagccgttcgaacaatttttccaaatgccacgcataggttatgtgcttggcacttagagaagaatgtcacgtcaaaCGTGAAGGATGACAATTTACGTCGGCTTTTTAATCGGTGGATTTATTCTGAAATGAGGGTTGATGACTTTGAGGCAGAGTGGGCTCAGGCCGCAGCCGATTATGGCTTGCAGGATTCACTATGGTGGAACCAAGTCTATGGGAAAAAGGAGATGTGGGCAAACGCTTTCTTGTGCGAGAAATTCTGTGCCGGGTATCGGACAACATCACGGTGCGAAGGGATAAATTCGGTGTGCAAGAATTTTCTTGAATCAAAACACAGTATGTTGGAGCTTGTTCAGAATCTAGAACTTCTTGTGCGAGAGTATAGGAACAATGAGTTGTTGGCACAGTTCAGGTCTATTTATAGTGAACCAGTGCTGACAACCTCGCTGGAATCCCTTGAGCGTCATGCAGCTTCTGTTTACACGAGAGCGGTATTTGTAGATGCTAAACGGGAGATTCAGAGTGTATCTTCAGTTAATTTTGTTGGGGTGAGGCGGTCATTGACCACAAAGGTGTACACAGTTGAGGAGTACGGTCATCCAGGCCGTCATATTATAGTATTATGTGATAAGAACATGGGTAAATTAGAATGTGGTTGTAATTTTTGGAGAATTCAGGGGTTTCCATGCAAACATATGTTTTTTGTCATGAAGCATGAACACTTGTTGACAATACCTAGTAGTCTAGTGTTGAAGCGTTGGACCAAAGAAGCAAAATCATTAGGCGCATACGCTGAGAAAACAGATGACGGGGGTGATAGAGGGTTCTTGCTTCGCCATGGAGCACTTCATTCGGCGTCCAGATGGTTGTTCTTTTTAGGGGCCCAGAAGGTTGGGTTATTCGGTGTTGCTTTGGAGGGGATTCGCCGACTATGTGCAACATTGGAATCAGAGTTGGCCAATGGTGTTCATCCTACCAAGTCTAAGCAAGGCGGTGAAATTCGAGATCCAGTTGTTGTGCGAACAAAGGGAGCACCAAGGGGTCATAAGAGAAAGGCGTCCAAGAGAAAGTGTGTGAACTGCAACAAGCCGGGACATACAAAGAGGACTTGCACAGATGGAAGGCCTTGTCGGGGAAAAAAACCCCGAGTGGATACATTCAATTCTGCTGAGGACGGGGGACAAAGTGAGGAGGTGGCTGAACTGGAAGCGACCGGATCCAATGATCAAACTATTGGGGTAGAACACGTGATTGGAGGTGGGTCTGTTCGAATGCCGCAGGTAGAACTAATCAATACGGTTCCATTTTGCAGATACCGTGGGCAGTAG 2772 0.3781 MMMPHINIRRITRFWLIPTVQDEDLLCPGNGLGAAFSTLIATFKAFQQKPPELKNGSGQLHPPFVAPKEFRCGALMPIPSVPVLVDSACKCHPSVVAVIGFSCFGFLVAAGRRKSRKILIACVWRGGRGVAVARWHALRIWHCVVNILMDVPEAVDINAMCEEGAGVMGTVDFGDVADITENDILRKVFRSEDDAYEFYKRLGKFYGFGIRRGDMFKDEKGNLVRRRFFCNREGQRDKKHYNRIDRKRPHKPETRTNCEARMCIYLDKDSSLWRVKKIILNHNHNMTHPGMVHLITSFRSLTDAAKAQLDGFQGCGISTAKTMRYMAGVSGGYSLVGFLKKDAYNYVDKRRRAKIVDGDANAAIVYLEGKVDADPTSMARYNVTEDEMLANLLWADGGNRIDYQYFGDVLAFDSTYKKNKYKRPLVIFSGCNNHKQTCIFGFGLVLDESIASYTWLLENFLEVMCSKQPSVVVTDGDDSIREAVRTIFPNATHRLCAWHLEKNVTSNVKDDNLRRLFNRWIYSEMRVDDFEAEWAQAAADYGLQDSLWWNQVYGKKEMWANAFLCEKFCAGYRTTSRCEGINSVCKNFLESKHSMLELVQNLELLVREYRNNELLAQFRSIYSEPVLTTSLESLERHAASVYTRAVFVDAKREIQSVSSVNFVGVRRSLTTKVYTVEEYGHPGRHIIVLCDKNMGKLECGCNFWRIQGFPCKHMFFVMKHEHLLTIPSSLVLKRWTKEAKSLGAYAEKTDDGGDRGFLLRHGALHSASRWLFFLGAQKVGLFGVALEGIRRLCATLESELANGVHPTKSKQGGEIRDPVVVRTKGAPRGHKRKASKRKCVNCNKPGHTKRTCTDGRPCRGKKPRVDTFNSAEDGGQSEEVAELEATGSNDQTIGVEHVIGGGSVRMPQVELINTVPFCRYRGQ 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01012 923 SMART 26again6 697 724 IPR006564 GO:0008270
Adu10g01012 923 PANTHER OS02G0262500 PROTEIN 183 778 - -
Adu10g01012 923 Coils Coil 592 612 - -
Adu10g01012 923 MobiDBLite consensus disorder prediction 851 876 - -
Adu10g01012 923 Pfam FAR1 DNA-binding domain 197 286 IPR004330 -
Adu10g01012 923 ProSiteProfiles Zinc finger SWIM-type profile. 684 722 IPR007527 GO:0008270
Adu10g01012 923 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 183 778 IPR031052 GO:0006355
Adu10g01012 923 Pfam MULE transposase domain 409 503 IPR018289 -
Adu10g01012 923 MobiDBLite consensus disorder prediction 851 868 - -
Adu10g01012 923 ProSiteProfiles Zinc finger CCHC-type profile. 837 854 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01012 Adu-Chr10 17883371 17889244 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g01012 MULE 2.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01012 - - adu:107493380 1538.09