Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01009 ATGGTGAATGCAATGGAGTGGCCGAAGCAGCAACAGCAGAATCAGAATCAGCAGAGGAATGTGATTGCTGGAGAGATCATGTATGTGAAGGTGATGACCGATGAGCAGTTAGAGACTCTGAGGAAGCAGATCGCTGTATATGCCACCATTTGTGAGAAGCTAATTGAGATGCACAAAACCCTCTCTGCTCAGCAAGACCTTGCTGTTGACGGGGAAACAGGGCTTGGAAGCATGTATTGTGATCCATTGATGGCCTCTTCTGGCCACAAAATAACTTCCCGGCAGCGGTGGACTCCGACATCTGTGCAGCTTCAGATTCTTGAGAGGATATTTGATCAGGGGACCGGAACTCCAAGCAAGGAGAAGATCAAGGAGATTACTGCTGAACTTAGTAAGCATGGTCAAATTTCTGAGACTAACGTCTACAACTGGTTTCAGAACCGACGTGCTAGATCGAAAAGAAAGCAGCAGAATGTGGCAGCTAGCAATAACACTAACACCAACACTGAATCAGAAGTAGAGACTGAGGTTGATTCCAAGGATAAGAAGACTAAACCAGAGGAGTTTCAGTCGCAGCAGAGTCTCGCTAATGTGGCTGCTCAGAATGTCTGCTTCCATAACCGTGACTTGCCTTACTTGAATCCGGAATCCAATAAATCAGATTCCATTTTCCCATCAGATGGTAGCCTAACATCTACAAGCAACTTTGATCATATGCCTGTTTTCAATGGGATGATAGCAAATTCAAGGAGTGATTACCTTGCTGGGAAAATGGAAGCACCTGATAGTTACAATATATACCATGAAGGAGGAGACTACAACATTACAGATAGACACTTGTCGAATGGGCTGCGCTGGATGGCCCATGACCTGCCGTGA 879 0.4562 MVNAMEWPKQQQQNQNQQRNVIAGEIMYVKVMTDEQLETLRKQIAVYATICEKLIEMHKTLSAQQDLAVDGETGLGSMYCDPLMASSGHKITSRQRWTPTSVQLQILERIFDQGTGTPSKEKIKEITAELSKHGQISETNVYNWFQNRRARSKRKQQNVAASNNTNTNTESEVETEVDSKDKKTKPEEFQSQQSLANVAAQNVCFHNRDLPYLNPESNKSDSIFPSDGSLTSTSNFDHMPVFNGMIANSRSDYLAGKMEAPDSYNIYHEGGDYNITDRHLSNGLRWMAHDLP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01009 292 Pfam Homeodomain 94 154 IPR001356 GO:0003677
Adu10g01009 292 PANTHER - 3 276 - -
Adu10g01009 292 ProSiteProfiles 'Homeobox' domain profile. 90 155 IPR001356 GO:0003677
Adu10g01009 292 MobiDBLite consensus disorder prediction 156 172 - -
Adu10g01009 292 CDD homeodomain 94 156 IPR001356 GO:0003677
Adu10g01009 292 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 276 IPR044559 GO:0003700
Adu10g01009 292 SMART HOX_1 92 159 IPR001356 GO:0003677
Adu10g01009 292 MobiDBLite consensus disorder prediction 152 193 - -
Adu10g01009 292 Gene3D - 95 161 - -
Adu10g01009 292 SUPERFAMILY Homeodomain-like 92 158 IPR009057 -
Adu10g01009 292 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01009 Adu-Chr10 17809384 17811648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01009 5 276 Wox Gene Family AT4G35550 48.264 4.33e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Adu10g01009 Homeodomain 4.3e-18 CL0123