Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01005 ATGCGGTTGCTAAACATAGAGAATAACGATGATTGCATAAAGTACATTGTGTATAAGCATGGGAGGCCCGATTTTATGTGGACCGTTGAATTTTGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCCTGCGAACATATTGTGAAAGTTCTGGTTGACAGAGACATTTGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTGAAGTCAACACTCAATGATCCAAGTGGGTTCACCAGGAATACTGTTGTTATTAGTCGTCAAAGTGTCATGATGGAATTTTCTAAACAATTGGCTGCTGTTGCTGCTAAAGTATCAGAGAGATATGAAGAGACACATGACATAATTATGGGGTTGTACTCATCTTACAAGGCTGCAGAAGAAGACACTAATCAACCTCAGTTAGGTGTAGCTAAAAGTAGCAATCTGTTTGTGCATCAAACCAATATAGGCTCAGGACAACCATCTAAGAAGAAGCGgtaccgccggtgcCACCTCTGTTCAACCTTGCCACCCCTTCAGCCACCTCTTGCCAGCCACTGTCCCTGTCCTCTCCAGCTCTGCATTTCTCCAAACTTCCAACTTCTAACCCTAGCGCAGAAATCCAGAAGAAATAAGCATGGTCGCGGCCACATCAAATTCATCCGTTGTTCCAACCGTGGCAAGTGCTGCCTTAAGGACAAATCAATCAAGCGGTTCCTTGTGAGGAACATTGTTGAGCAAGTTGCAGTTCGTGATGTTCAGGAAGCCTGTTTCTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAGTATTGTGTTTTCTGTGCCATCCACTCTCATCTTGAGAGCGTGCATTCTCGCACCGATAGAAGGAATCGCGAGCCGCCACAGTGCTTTGCCAAGCATAGAGATGATGCACCAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGTGGAGTAGGAGCTGCCCCTCGATATATTGGAGGCTGA 1020 0.4461 MRLLNIENNDDCIKYIVYKHGRPDFMWTVEFCQEEMIFMCTCLRMESFGIPCEHIVKVLVDRDICEIPRSLVLDRWTKKVKSTLNDPSGFTRNTVVISRQSVMMEFSKQLAAVAAKVSERYEETHDIIMGLYSSYKAAEEDTNQPQLGVAKSSNLFVHQTNIGSGQPSKKKRYRRCHLCSTLPPLQPPLASHCPCPLQLCISPNFQLLTLAQKSRRNKHGRGHIKFIRCSNRGKCCLKDKSIKRFLVRNIVEQVAVRDVQEACFYEQYTLPKLYVKMQYCVFCAIHSHLESVHSRTDRRNREPPQCFAKHRDDAPRPGQPGQAPRPAGGVGAAPRYIGG 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01005 339 Pfam SWIM zinc finger 40 59 IPR007527 GO:0008270
Adu10g01005 339 PANTHER 40S RIBOSOMAL PROTEIN S26 214 334 IPR000892 GO:0003735|GO:0005840|GO:0006412
Adu10g01005 339 ProSiteProfiles Zinc finger SWIM-type profile. 25 63 IPR007527 GO:0008270
Adu10g01005 339 Pfam Ribosomal protein S26e 214 311 IPR000892 GO:0003735|GO:0005840|GO:0006412
Adu10g01005 339 PANTHER 40S RIBOSOMAL PROTEIN S26 214 334 - -
Adu10g01005 339 MobiDBLite consensus disorder prediction 293 339 - -
Adu10g01005 339 MobiDBLite consensus disorder prediction 293 316 - -
Adu10g01005 339 Gene3D Ribosomal protein S26e 211 320 IPR038551 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu10g01005 Adu-Chr10 17655994 17659222 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01005 216 322 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 71.028 1.27e-49 160