Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00989 ATGGTTTCTAGAGAGCAAAAGAGAGCAGCACTATTGCACGAGAAGCTGCAACTTCTTCGTTCCATTACTAACTCTCATGCTCTTAACAAGACGTCGATTATAATCGATGCATCAAAGTACATCAGAGATCTAAAGCAAAAAGTAGAAAGACTCAATCAAGACATGGCGGCTGCACAAACATCCACTCACCAAAATCCTTTGCCTATGGTAAAAGTAGAAACCCTAGAGAAGGGGTTTCTTGTAAACGTGGTGTCAGCAAAGAGTTGTCCAGGTCTTCTTGTTTCCATATTGGAGGTGTTTGAAGAGATGGGTCTCACTGTTATGGAAGCTAGGGTTTCTTGCACAGACACTTTTCGCTTTCAAGCTGTTGGAGGAGAAAATGAAGAGGATGGTGAGAGTATTATTGATGCACAAGCTGTGAAACTAGCAGTGGGGCAAGCAATCAAGAATTGGAGCCAACAAAGTACTGATGATGATGATGATAATGATGATGATCAACAGTGA 504 0.4167 MVSREQKRAALLHEKLQLLRSITNSHALNKTSIIIDASKYIRDLKQKVERLNQDMAAAQTSTHQNPLPMVKVETLEKGFLVNVVSAKSCPGLLVSILEVFEEMGLTVMEARVSCTDTFRFQAVGGENEEDGESIIDAQAVKLAVGQAIKNWSQQSTDDDDDNDDDQQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00989 167 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 157 - -
Adu10g00989 167 Gene3D - 2 67 IPR036638 GO:0046983
Adu10g00989 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 66 IPR036638 GO:0046983
Adu10g00989 167 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 157 - -
Adu10g00989 167 Coils Coil 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00989 Adu-Chr10 17198806 17201207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00989 5 144 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.289 1.49e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00989 - - tcc:18600910 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00989 10 17198806 17201207 Adu07g00718 07 8384618 8386443 ECH
Adu04g02030 04 99809453 99812687 Adu10g00989 10 17198806 17201207 ECH
Adu01g00506 01 6980883 6988855 Adu10g00989 10 17198806 17201207 ECH
Adu10g00989 10 17198806 17201207 Adu10g00989 10 17198806 17201207 ECH
Adu10g00989 10 17198806 17201207 Adu07g00718 07 8384618 8386443 PCT