Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00988 ATGGATTGTTGTGTGTGCACAAGCATGCCGTTGATATTAAGGCCACCGAGGAACTCAATATGTGGGGCTTGTTATGAAGGAGCAAGGACCATAATCAACATGATCAACAATCTCGAAACTGAGAAAACAAAACAAAACACTAATCCCAATAACAATAATAATGGCTCTCTGGCTTCAAGGCGAAATTCCAGTAAGACATTGGATGATTGTATTAGATGGTGGTCAGAGCAGATAGAGATTTTGAATCAACAAAAGGAGGATTTGGGTTTTCTTAGAGGCATTGTTACAGCCTTCAAAGAACAAATTCACACCGATATACTTGTTAGCCCAGGTGGCCATGGTCTTCCAATACCTGCACATAAGTCTGTATTGGCAACAAGATCAGAAATCTTTAAGAACATGCTTGAGTGTGATGAATGCAAAGCAGCACCCAATAACCAAACCATAACCATACCAGACCTGAACCATGAAGAGCTATCATCTCTACTAGAGTTCCTCTACAGCGGCACACTACCTGAAGAAACAATCGCAAAGGATGTCTACGCCTTATCGCGCGCCGCCGATAAGTACGCCATCCCACATTTGTTAAGGCACTGCGAGAGGTATTTGCTGAGTTCACTCGACACTTCCAATGCACTCCAGACGCTTGAGATCGCCGACGTGTGTTCCAGTCACAATTTGAAGGAGACAACGTTGGTTTTCTTAGTTAAGAACATTGAGCATGTTGTGTCATCGCCTAGGTTTGAAGCTTTTGTCCATAGGAATCCACACTTAACCGTGCAATTGGTTTCAAGGGCTTTTGCAAATGGTTCCAAATAA 819 0.4286 MDCCVCTSMPLILRPPRNSICGACYEGARTIINMINNLETEKTKQNTNPNNNNNGSLASRRNSSKTLDDCIRWWSEQIEILNQQKEDLGFLRGIVTAFKEQIHTDILVSPGGHGLPIPAHKSVLATRSEIFKNMLECDECKAAPNNQTITIPDLNHEELSSLLEFLYSGTLPEETIAKDVYALSRAADKYAIPHLLRHCERYLLSSLDTSNALQTLEIADVCSSHNLKETTLVFLVKNIEHVVSSPRFEAFVHRNPHLTVQLVSRAFANGSK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00988 272 Gene3D Potassium Channel Kv1.1; Chain A 75 208 IPR011333 -
Adu10g00988 272 Gene3D - 209 272 - -
Adu10g00988 272 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 270 - -
Adu10g00988 272 CDD BTB_POZ_ZBTB_KLHL-like 103 190 - -
Adu10g00988 272 Pfam BTB/POZ domain 101 206 IPR000210 GO:0005515
Adu10g00988 272 CDD BACK 208 248 - -
Adu10g00988 272 ProSiteProfiles BTB domain profile. 104 175 IPR000210 GO:0005515
Adu10g00988 272 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 270 IPR044784 -
Adu10g00988 272 SMART BTB_4 104 207 IPR000210 GO:0005515
Adu10g00988 272 SUPERFAMILY POZ domain 90 206 IPR011333 -
Adu10g00988 272 MobiDBLite consensus disorder prediction 42 62 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Adu10g00988 BTB 7.3e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00988 K10523 - gmx:100777561 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00988 10 17169299 17171040 Adu10g00988 10 17169299 17171040 ECH