Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00964 ATGAATTCACCATTGACGCAGTTCGTTTCTTCGAGAAGGATGGGCGTGTATGATCCTATCCAGCAGATCAATATGTGGGGAGATAGCCTCAAAAGTAATGTCAATTTAAGTGCATCCATTCCCTTAATTGATGAAGCCGACATTAAGTTTGATAGTCAGTCAGAGGATGCTTCTCATGGTATCCTGGGAACAAATATCAAATATGACCAAGAAGCAAGTAAACCTATTGATAAGATACAGAGACGACTTGCGCAAAATCGAGAGGCTGCTCGGAAGAGTCGTTTGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCTAGTCGTTTGAAGTTGATGCAGCTAGAGCAAGAGCTTGAACGTGCGAGACAGCAGGGAATGTATGTAGCCGGTGGATTGGATACTAATCATCTAGGTTTTGCTGGACCTATTAATTCAGGAATCACAGCTTTCGAGATGGAGTATGGACACTGGGTTGAGAAGCAAAATAGTCAAATCTTAGAACTGAGAAACGCTTTAAATTCTCATATTGGTGACTTAGAGCTGAGGATACTTGTAGATGATATGATGAATCACTACACCGAAATCTTTCGTATGAAATCTGCTGCTGCAAAAGCAGACGTCTTCTATGTAATGTCCGGCATGTGGAAAACTACGGCCGAGAGATTTTTCTTATGGATTGGAGGCTTTCGCCCCTCTGAACTTCTAAAGGTTCTTCTTCCTTTGATTGAACCTTTGACGGAGCAACAACGATTGGATGTCTGCAACCTCGGACAATCATGTCAGCAAGCCGAAGACGCCCTTTCACAAGTCTCCTGGTTTCCTTCTTCAAGAATCCCGGAAATGAAGATTTCGGATTCTGACCATTTTTTTGTCCTGAAGCGATATCTCAAACTAGGAAAAGCTGATCATCTTCGGAAGGAGACACTGCAGCAGATGTCTCGAATATTGACTATCCGTCAGGCAGCTCGATGCTTGCTTGCTTTGGGGGAATACTTCCAACGCCTGAGAGCTCTGAGCTCGCTTTGGTCGAATCGTCCTCGCGAACCAGCTTAG 1053 0.4397 MNSPLTQFVSSRRMGVYDPIQQINMWGDSLKSNVNLSASIPLIDEADIKFDSQSEDASHGILGTNIKYDQEASKPIDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGMYVAGGLDTNHLGFAGPINSGITAFEMEYGHWVEKQNSQILELRNALNSHIGDLELRILVDDMMNHYTEIFRMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLLPLIEPLTEQQRLDVCNLGQSCQQAEDALSQVSWFPSSRIPEMKISDSDHFFVLKRYLKLGKADHLRKETLQQMSRILTIRQAARCLLALGEYFQRLRALSSLWSNRPREPA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00964 350 Gene3D - 77 127 - -
Adu10g00964 350 PANTHER TRANSCRIPTION FACTOR TGA9 1 269 - -
Adu10g00964 350 PANTHER TRANSCRIPTION FACTOR TGA9 299 349 - -
Adu10g00964 350 Coils Coil 97 124 - -
Adu10g00964 350 Pfam Seed dormancy control 165 239 IPR025422 GO:0006351|GO:0043565
Adu10g00964 350 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Adu10g00964 350 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Adu10g00964 350 ProSiteProfiles DOG1 domain profile. 147 345 IPR025422 GO:0006351|GO:0043565
Adu10g00964 350 SUPERFAMILY Leucine zipper domain 78 120 IPR046347 GO:0003700|GO:0006355
Adu10g00964 350 Pfam bZIP transcription factor 78 112 IPR004827 GO:0003700|GO:0006355
Adu10g00964 350 PANTHER TRANSCRIPTION FACTOR TGA1 1 269 - -
Adu10g00964 350 PANTHER TRANSCRIPTION FACTOR TGA1 299 349 - -
Adu10g00964 350 CDD bZIP_HBP1b-like 78 130 - -
Adu10g00964 350 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00964 Adu-Chr10 16499241 16502617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00964 1 350 Calmodulin-binding Proteins AT5G65210 63.073 2.10e-157 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Adu10g00964 DOG1 5.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00964 K14431 - gmx:100793353 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00964 10 16499241 16502617 Adu10g00964 10 16499241 16502617 ECH
Adu03g03171 03 117134364 117137093 Adu10g00964 10 16499241 16502617 PCT