Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00952 ATGATAGAGAATGTGGGTGAAGAGAAATGTGAGAGTCATGTAAGAAAAGAGCACCCATCATACATATATATATGTCCCATCATTTCAAATAAGAAACCAAACCATGATGATGATAGGAAGCTAAAATCATCATCATATACAGGTCCAATCACAACAAAGAAGTACCTCAGATTCATCGAAGAGAAGAACCCAACAATTTGCTACAGCAAGAAGAGTAGTAAGTTATTGAAGCTGAAACCGCCACGGCACGTGGAGTGCACGCTATGCTTGTCGGAGTTCATGGAAGGGGAGAAGCTGAGGAGTCTGAAATGCCAACACACGTTTCACAGGGATTGCTTAGACACATGGCTCAAAGACTACTGCGCCACGTGTCCTTTGTGTAGGTTAAAAGTGGTGTCCGATGATGTTGTTTCCCAGCACCGTGAGCTTAGAAAGCAAGCTGATTCTAACGGCATGGTAGCCATTACCATGTAA 474 0.4304 MIENVGEEKCESHVRKEHPSYIYICPIISNKKPNHDDDRKLKSSSYTGPITTKKYLRFIEEKNPTICYSKKSSKLLKLKPPRHVECTLCLSEFMEGEKLRSLKCQHTFHRDCLDTWLKDYCATCPLCRLKVVSDDVVSQHRELRKQADSNGMVAITM 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00952 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 137 IPR013083 -
Adu10g00952 157 Pfam Ring finger domain 85 128 IPR001841 -
Adu10g00952 157 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 47 149 - -
Adu10g00952 157 PANTHER - 47 149 - -
Adu10g00952 157 SMART ring_2 86 127 IPR001841 -
Adu10g00952 157 ProSiteProfiles Zinc finger RING-type profile. 86 128 IPR001841 -
Adu10g00952 157 SUPERFAMILY RING/U-box 85 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00952 Adu-Chr10 15854740 15857462 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00952 85 139 C3H Transcription Factor Family AT1G15100 52.727 4.43e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00952 K16282 - gmx:102668078 133.265