Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00939 ATGGCCAAGAGACAAGATCTGGGTCTAGAGGAGCCAGATACACATGAGGAGGAGGATGAGCAGCCTGCCGACCATGAGAGTGGAGAGGAGCCAGTTGCTTCTACAGAGAAGGACTCCTGGGATGAAGAAGAGGATAAACTACTAATTGAAGCTCACAAGCAAGTTGGAAATAAGTGGGCTGAAATTGCAAGGAGGCTCCCCGGCCGCACTGAGAACACAATTAAGAACCACTGGAACGCCGCTAAGCGAAAGAAGAGTAGCAAGAGACAACCCAGGAAGAAGAAGAACCAGACTTACTTTGGGGAATCATTGCTTGAGCGCTACGTCAAAGAGGTCACTGCAGCTGATGCGGCAAAAAAGCAGCTAAAGAAATCCATGAAACAGTTGAAAATAAAGAATGAGGATTACAACCTGCAGCAGAATGCATGCATCACTGGGTATGGTGGCAATATACCAGTGAAGTTCAGTTCTAATGAAATTGGGAATGGTTCTGTTCTGATTGATGGCACAGAGAACTATGTTCCAATGGAGCTTGATATGATTGGAATTGAGGCCTACATGAACTAG 567 0.4603 MAKRQDLGLEEPDTHEEEDEQPADHESGEEPVASTEKDSWDEEEDKLLIEAHKQVGNKWAEIARRLPGRTENTIKNHWNAAKRKKSSKRQPRKKKNQTYFGESLLERYVKEVTAADAAKKQLKKSMKQLKIKNEDYNLQQNACITGYGGNIPVKFSSNEIGNGSVLIDGTENYVPMELDMIGIEAYMN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00939 188 SUPERFAMILY Homeodomain-like 37 87 IPR009057 -
Adu10g00939 188 PANTHER MYB DOMAIN PROTEIN 100-RELATED 38 137 - -
Adu10g00939 188 ProSiteProfiles Myb-like domain profile. 32 82 IPR001005 -
Adu10g00939 188 MobiDBLite consensus disorder prediction 26 48 - -
Adu10g00939 188 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 86 IPR017930 -
Adu10g00939 188 SMART sant 36 84 IPR001005 -
Adu10g00939 188 Coils Coil 105 139 - -
Adu10g00939 188 MobiDBLite consensus disorder prediction 1 48 - -
Adu10g00939 188 PANTHER MYB PROTEIN-RELATED 38 137 - -
Adu10g00939 188 CDD SANT 39 79 IPR001005 -
Adu10g00939 188 Gene3D - 39 103 - -
Adu10g00939 188 Pfam Myb-like DNA-binding domain 37 79 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00939 Adu-Chr10 15519965 15523581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00939 37 112 MYB Transcription Factor Family AT4G18770 61.842 4.86e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu10g00939 Myb_DNA-binding 6.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00939 K09422 - adu:107469217 292.737