Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00886 ATGACTTCTAAAAAGAGGAAAATAGCATGGTCAGAGAAAGAGGACAATCTGCTACGAGATGTTGTTCAAAGATTTGGTGAAGGGCATTGGGCTACCATTGCAAAAGGAGGCAACTTTTCTGTTAAGAGAACGGCTAAACAGATAGATCAATATCTTTGGTGCAGGATGCTGATGTGGGAAGATGAGTTTTGTCAAGGAAGGAGTGCAAGTCTGGTGGAAGACATGGACGGAGGAGGAGAGGATCCAGTGAGAAAGACCTTTAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGCTTCCTCCTGAATGGACCGACCAGTTTGATTTTGGCATTCAGACTATTGATGCTTGTGGCCGGAGCCAATGTTGTCACTGTGACCGAGCTACACTGCCGCCAAGCTTTGCCTCTGTTCTACCACCAAGTTCTATACCTCTGTTCTACTTGTGATGCTCCTGTCGTGGTTGTTGTCGTCCTTGCACAACCGTAA 492 0.4512 MTSKKRKIAWSEKEDNLLRDVVQRFGEGHWATIAKGGNFSVKRTAKQIDQYLWCRMLMWEDEFCQGRSASLVEDMDGGGEDPVRKTFSKMSIQLYNYGEGFLLNGPTSLILAFRLLMLVAGANVVTVTELHCRQALPLFYHQVLYLCSTCDAPVVVVVVLAQP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00886 163 CDD SANT_TRF 10 48 - -
Adu10g00886 163 SMART sant 6 58 IPR001005 -
Adu10g00886 163 Gene3D - 1 58 - -
Adu10g00886 163 PANTHER GB|AAF34833.1 55 102 IPR044170 -
Adu10g00886 163 ProSiteProfiles Myb-like domain profile. 2 47 IPR001005 -
Adu10g00886 163 Pfam Myb-like DNA-binding domain 9 50 IPR001005 -
Adu10g00886 163 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 61 IPR017930 -
Adu10g00886 163 SUPERFAMILY Homeodomain-like 5 50 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00886 Adu-Chr10 13368567 13370894 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu10g00886 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00886 - - aip:110263389 215.312