Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00858 ATGGATTTCATAGTATTGTTTTTGCTATTGGCTACACTATGTTCTTCAGAGCTTGAAAATAATTCACAAGAGGAAGCCCTATATGCATTGAAGTTATCATTGAATGCTTCAAAAAATCAGCTTACTAACTGGAATAGAGACCAAGTCAGCCCGTGCACTTGGTCTAATGTTTACTGTGACCCAAGTGGCAATATTTATCAAGTTTCACTAGCATTTATGGGATTTACAGGATACTTGACACCAAGAATAGGAGCATTAAAAGGTCTTCAAACTCTTGTTCTAAATGGGAATGGCATCACTGGAGGTATACCAAAAGAATTAGGAAACCTTACAAGATTAGTCAGATTGGATCTGCAAAACAACAGATTAACCGGTGAAATACCCTCTTCCCTTGGTAACCTTAAAAAGCTTCAGTTCTTAACATTGAGTCAAAACAACCTCAACGGATCTATTCCTGAATCATTAGCCAATCTTCCAAGCCTGATCAATGTTCTTCTAGATTCAAATGATCTCAGTGGTCAGATTCCAGAAGGCTTATTCAATGTTTCTAAATACAATTTCACTGGAAATAAGTTGAACTGTGGCATGAATTATCGTAAACTTTGTGCCTATGATATTGCAGACCAAGGTTACTTAATAGTTTTAGGTTTAGTTGTTCTTATTTGTCTTGGTGGTCTACTGTTCTTCTGGCGCAAGAGCTACAAGCGTGATGTTTACGTAGATGTTGCAGGTGAAGTTGATGGGCGAATTGCATTTGGTCAGCTGAAAAGATTTGCTTGGAGAGAACTGCAAATAGCTACAGACAACTTTAGTGAGAGAAATGTTTTAGGACAGGGAGGCTTTGGGAAGGTTTATAAAGGTGTTCTACCCGATGGCACAAAAATTGCTGTTAAAAGGTTAACCGATTATGAAAGTCCTGGTGGAGATGCTGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTCCATAGGAACTTGTTACGGCTGATTGGGTTCTGTACGACTCCAACGGAGCGCCTATTAGTCTATCCCTTCATGCAGAACCTAAGTGTTGCCTATCGTCTTCGAGAACTTAAACCTGGGGAGGCTGTTTTGGATTGGCCTACGAGAAAAAAAGTGGCTCTGGGAACAGCCCGAGGCCTAGAATATCTTCATGAGCAATGCAATCCTAAGATTATCCATCGGGATGTGAAGGCAGCTAATGTATTACTGGATGGAGACTTCGAGGCAGTTGTAGGAGACTTCGGTTTAGCAAAGTTAGTTGACGTTCGAAGGACTAATGTGACAACTCAAGTTCGTGGGACCATGGGCCACATAGCTCCTGAATACTTGTCCACTGGAAAATCTTCAGAAAAGACTGATGTCTTCGGATATGGAATAATGCTTCTAGAGCTTGTTACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGAGGAAGACGATGTGCTGTTGCTTGACCATGTTAAGAAACTTGAACGGGAGAAAAGACTAGATGCTATTGTTGATCGCAACCTGAAACAAAATTACAAAATAGAAGAAGTTGAAATGATTGTTCAAGTTGCATTACTCTGCACACAAGCATCACCAGAGGACCGACCAGCAATGTCGGAGGTCGTGAGAATGTTGGACGGAGAAGGACTGGCCGAAAGGTGGGAGGAATGGCAACACGTAGAGGTCAACCGGAGGCAGGATTACGAGAGACTGCAAAGAAGATTGGGGTGGGGAGAAGATTCAATAAATAACCAAGATGCCATTGAGTTGTCTGGTGGAAGATGA 1782 0.4158 MDFIVLFLLLATLCSSELENNSQEEALYALKLSLNASKNQLTNWNRDQVSPCTWSNVYCDPSGNIYQVSLAFMGFTGYLTPRIGALKGLQTLVLNGNGITGGIPKELGNLTRLVRLDLQNNRLTGEIPSSLGNLKKLQFLTLSQNNLNGSIPESLANLPSLINVLLDSNDLSGQIPEGLFNVSKYNFTGNKLNCGMNYRKLCAYDIADQGYLIVLGLVVLICLGGLLFFWRKSYKRDVYVDVAGEVDGRIAFGQLKRFAWRELQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKKVALGTARGLEYLHEQCNPKIIHRDVKAANVLLDGDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKQNYKIEEVEMIVQVALLCTQASPEDRPAMSEVVRMLDGEGLAERWEEWQHVEVNRRQDYERLQRRLGWGEDSINNQDAIELSGGR 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00858 593 PANTHER LRR RECEPTOR-LIKE KINASE 5 593 - -
Adu10g00858 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Adu10g00858 593 Gene3D Transferase(Phosphotransferase) domain 1 347 564 - -
Adu10g00858 593 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 593 - -
Adu10g00858 593 Gene3D Ribonuclease Inhibitor 20 204 IPR032675 -
Adu10g00858 593 Gene3D Phosphorylase Kinase; domain 1 239 346 - -
Adu10g00858 593 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Adu10g00858 593 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Adu10g00858 593 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Adu10g00858 593 SUPERFAMILY Protein kinase-like (PK-like) 252 544 IPR011009 -
Adu10g00858 593 SMART serkin_6 270 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00858 593 ProSiteProfiles Protein kinase domain profile. 270 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00858 593 Pfam Protein kinase domain 271 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g00858 593 SUPERFAMILY L domain-like 21 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00858 Adu-Chr10 12496740 12502174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00858 1 593 Receptor kinase-like Gene Family AT5G10290 72.442 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Adu10g00858 Pkinase 6.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00858 - - gmx:100793416 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00858 10 12496740 12502174 Adu03g04487 03 134158696 134164573 PCT