Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00856 ATGGCAATTACACATTTTGGTAGTACGTTTGCAACTCAATGGGGAATTCGTCCTCAGGTTTTCGCAAGATCCAGCATAGTAAGCAAGACTACGTCATCCAGCCACAATGTTACAAGCAGGGTGAGCTTTATAGCGGCCCCAGCTTCAAGCTTTTTCTCCCGGGATTCCTCACGTGCACTATTTAACATGAGTTCATCTCAGACATATCACCGAAGGGGTTCAAGGTTGATAGTTAGAGCAGAAACAGATTACTATTCCGTCCTTGGCGTGTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGATCCTGGTGCAGAACAGAAATTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAGAAACGATCGATATATGATCAATATGGAGAGGCCGGGCTTAAAGGTTCAGGAATGGGCATGGGGGATTTCAGCAGTCCTTTTGATATATTTGAAACGCTTTTTGAGGGCATGGGTGGCATGGGTTCAAGAGGTGCTTGGAATGGAGCAATTGACGGTGAAGATGAATATTACAGTCTCGTTTTGAACTTCAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGGTTAGATAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCGGGGACCAAGTCATCCAGATGTAGCACTTGTGGCGGTCAAGGTCGTGTTGTCTCATCAACCAGGACCCCTCTAGGCATCTTTCAGCAGTCTATGACCTGCTCTTCCTGCAATGGAACCGGAGAAACATCAACACCATGCAGCACATGTTCTGGGGATGGTCGTGTGAGGAAAACAAAACGGATAAGTCTGAAGGTTCCCCCTGGTGTGGATTCTGGTAGCCGTTTAAGAGTCCGGAATGAAGGCAATGCTGGAAGACGTGGCGGTGCACCTGGTGACCTCTTTGTAGTTATCGAAGTTATCCCAGATCCTGTCCTCAAACGAGATGACACCAACATTCTGTACACCTCCAAGGTGTCTTATATTGATGCTATCTTGGGAACTACAATCAAGGTTCCTACTGTAGATGGCATGGTGGATTTAAAAGTCCCGGCTGGGACTCAACCCGGCANNNNNNNAAGGTGTTCCGCTGCTGAATAA 1167 0.4559 MAITHFGSTFATQWGIRPQVFARSSIVSKTTSSSHNVTSRVSFIAAPASSFFSRDSSRALFNMSSSQTYHRRGSRLIVRAETDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKDPGAEQKFKDISNAYEVLSDDEKRSIYDQYGEAGLKGSGMGMGDFSSPFDIFETLFEGMGGMGSRGAWNGAIDGEDEYYSLVLNFKEAVFGVEKEIEIRRLDSCGTCNGSGAKPGTKSSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGETSTPCSTCSGDGRVRKTKRISLKVPPGVDSGSRLRVRNEGNAGRRGGAPGDLFVVIEVIPDPVLKRDDTNILYTSKVSYIDAILGTTIKVPTVDGMVDLKVPAGTQPGXXXRCSAAE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00856 388 SUPERFAMILY HSP40/DnaJ peptide-binding domain 335 383 IPR008971 GO:0006457|GO:0051082
Adu10g00856 388 CDD DnaJ_zf 220 283 IPR001305 GO:0031072|GO:0051082
Adu10g00856 388 TIGRFAM DnaJ_bact: chaperone protein DnaJ 83 383 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Adu10g00856 388 Gene3D - 330 387 - -
Adu10g00856 388 PRINTS DnaJ domain signature 119 139 IPR001623 -
Adu10g00856 388 PRINTS DnaJ domain signature 103 118 IPR001623 -
Adu10g00856 388 PRINTS DnaJ domain signature 85 103 IPR001623 -
Adu10g00856 388 PRINTS DnaJ domain signature 139 158 IPR001623 -
Adu10g00856 388 CDD DnaJ 83 136 IPR001623 -
Adu10g00856 388 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Adu10g00856 388 ProSiteProfiles Zinc finger CR-type profile. 207 288 IPR001305 GO:0031072|GO:0051082
Adu10g00856 388 Hamap Chaperone protein DnaJ [dnaJ]. 80 388 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Adu10g00856 388 Gene3D - 220 283 - -
Adu10g00856 388 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Adu10g00856 388 Pfam DnaJ C terminal domain 195 383 IPR002939 -
Adu10g00856 388 PANTHER BNAA01G34580D PROTEIN 32 379 - -
Adu10g00856 388 SUPERFAMILY HSP40/DnaJ peptide-binding domain 188 343 IPR008971 GO:0006457|GO:0051082
Adu10g00856 388 Pfam DnaJ central domain 220 283 IPR001305 GO:0031072|GO:0051082
Adu10g00856 388 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 207 287 IPR036410 -
Adu10g00856 388 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 379 - -
Adu10g00856 388 Pfam DnaJ domain 83 144 IPR001623 -
Adu10g00856 388 SMART dnaj_3 82 139 IPR001623 -
Adu10g00856 388 SUPERFAMILY Chaperone J-domain 79 181 IPR036869 -
Adu10g00856 388 CDD DnaJ_C 191 379 - -
Adu10g00856 388 Gene3D - 190 325 - -
Adu10g00856 388 Gene3D DnaJ domain 80 183 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00856 Adu-Chr10 12435612 12440149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00856 84 146 C2H2 Transcription Factor Family AT1G74250 43.478 6.62e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00856 K03686 - gmx:100786143 642.114