Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00838 ATGCCGCCGACGGTGTTGTGGCTGCCGTTTTGGGTCGTGCGCGTGGTCTGGTTGTGGTCGAAGTGGTCCGACTGGGTAAAGGTCGTGGCCAAGTGCGCTAAGCATCAGATTATATTCCTCGTCGCAGGCTTGGATTGGGTCCCTCGATCTCTCATCCTGAACATTGGCCAGCTGTGTCCGATGGATTTCAGGCACATGTTCAACAATGAGGGTGAAGACTCAGATGGGGGTAGCTCGGAGGATTGTTGGGCACATTATTGTGGAAGCGACGATGATTATGATGACGAGGAGAGCCTTGAGGACCGACGAGATCCCGAACCGAGAAAGAGGTATGAAGCGGATGCCGTTTACGACGAGGGGGCTGATGGTGCCAAAGATGTGGAAGGTGCAGGTCTCAGCTGGCAAGTCGTCGTGGAAGACTTCTTGGGTAGAGAGTTTGGTACAGAGGAGGATGCCTATGCTGCCTACAAGGAATTTGCCAGATTCAGGGGTACTAGACATCGTAAGCACTATGATCGACCTGAGCGAGTAAGGGAGGAGAGGCCTGAGATTCGAACAGACTGTAAGGCCAAATTGAAGATTTACTACGATATGCAACAGAGCGTGTGGAAGGTAAGAACCATCGTTGACGAACATAACCATGAGCTTGCCCCAGCAATGTTTACAAATCTCCTTCCTAGTCATCGAAAGATGAGCGAAGACGACAAGGCACAGGTGGATAGTTTCAAGCAGTTTAGGATTGCAACCTCGAAAATAATGGCTTACATGGCAGGGCAATCTGGTGGATATGagaagaattgcatccaaagggttaaggaaacagaattccACAAGGTTTTTCAGAAAGCGCTGTATGCAAACTTGGATATCAACAAGTTTGAGGAGTATTGGAAGACGGCGGTTGAGTCGCTTGGCCTACAATATAACAGTTGGGTTCAGAGCACATACGATTGTAGAGAAAGCTGGGCAATGGCCTACCTGAGGGACACATTCTGTGCGGGATACAGGACAACTTCAAGATGTGAAGGGATCAATGCTTTCGTTAAGGGTTTTCTTAGATCAACTGATAGCATTTTGGAACTTGTACACGGTTTAGACCGAGTTGTAAAAAACTATCGGAATAATGAAGTGTATACACAAGCGGTTTTCAGAGAAGTGAAGAAACAAATAAAGGGTGTGGCGACGCTATTGTTTCGGGGCAAGGAAAGCATTAGCACGACATGTGTGTACAAGTTTTCTAAGATGGGAAAGCCTAATAGGACATACAGGGTGTTGTATGATCCGAACGAGGAAATGATTGAGTGTGAATGTTCAATGTGGAATAGTGAGGGGATTCCCTGTAGTAATATATTCTGTGTGATGAAGTATGAGGGCTTAGAAAAAATACCGAGTGGTCTTATTCTGAGCAGATGGTTCAAGGATACAAAGGATTGGAGATCAAAACCCCCTGAAAGTACAGAGGGCCATCAAGGACGCTTGCTTAGATATGGTGCCCTTTGCGGGCGATGA 1509 0.4606 MPPTVLWLPFWVVRVVWLWSKWSDWVKVVAKCAKHQIIFLVAGLDWVPRSLILNIGQLCPMDFRHMFNNEGEDSDGGSSEDCWAHYCGSDDDYDDEESLEDRRDPEPRKRYEADAVYDEGADGAKDVEGAGLSWQVVVEDFLGREFGTEEDAYAAYKEFARFRGTRHRKHYDRPERVREERPEIRTDCKAKLKIYYDMQQSVWKVRTIVDEHNHELAPAMFTNLLPSHRKMSEDDKAQVDSFKQFRIATSKIMAYMAGQSGGYEKNCIQRVKETEFHKVFQKALYANLDINKFEEYWKTAVESLGLQYNSWVQSTYDCRESWAMAYLRDTFCAGYRTTSRCEGINAFVKGFLRSTDSILELVHGLDRVVKNYRNNEVYTQAVFREVKKQIKGVATLLFRGKESISTTCVYKFSKMGKPNRTYRVLYDPNEEMIECECSMWNSEGIPCSNIFCVMKYEGLEKIPSGLILSRWFKDTKDWRSKPPESTEGHQGRLLRYGALCGR 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00838 502 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 176 268 - -
Adu10g00838 502 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 376 496 IPR031052 GO:0006355
Adu10g00838 502 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 273 375 IPR031052 GO:0006355
Adu10g00838 502 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 176 268 IPR031052 GO:0006355
Adu10g00838 502 MobiDBLite consensus disorder prediction 92 112 - -
Adu10g00838 502 Pfam FAR1 DNA-binding domain 167 217 IPR004330 -
Adu10g00838 502 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 376 496 - -
Adu10g00838 502 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 273 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00838 Adu-Chr10 11885794 11889564 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g00838 FAR1 1.7e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00838 - - adu:107469043 504.212