Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu10g00834 | ATGAAATGGTGGAACTGCCCTTATATGTTCGCATTACGAAATTCGATGAACTCCTTGAAGGATTGCGGCTTCAATCTCATGATTAGATTCGGGAACGCTGAGCATATCATACAACAGCTTGCATCTCAGGTGAATGCTAGTTGTGTATTTGCAGAACAAGAGGTGGAGTATGAATTGTACCTGTTTTTGGATGTTGTGAAGGAGTATTCTAGGTCTAACAAAAGAGACAAGGAGGATACTTCCATCAATAACATGCCTCACACACTAAGCCTCCCTGATCAGGTCAAGCTTGTAGAGTTACTAGAACGAGAAAGTGTAGACATTATTCAAACCGAGGGAGGAAAATGCTCAAATCCTACAAAGTATGGTGTTTTAGGCTTGATTGAGAAGTTAATTGAAATTCAACTTCCTAGGGGGTTCAATGATGCTGTTAATGGGTTTGTGGAAGATGGTTGGTCACTGCTAGGCAATGATAGGATAGAAGATGTGACTATAGCTGTTAATGCTGTTGCAGGATGTTCCTCCGGCTTTGCTTGTTTGACTCGATCTGAATGGGTTGATTATGGTGTTGATGCATACTCCGCTGCATGTTTTAAGGCTACTCTCTATGCTGTTCCTTGTGCAAGAACTGGTGGCTTCCCAGGCACTCAGTGGGGTTGA | 660 | 0.4258 | MKWWNCPYMFALRNSMNSLKDCGFNLMIRFGNAEHIIQQLASQVNASCVFAEQEVEYELYLFLDVVKEYSRSNKRDKEDTSINNMPHTLSLPDQVKLVELLERESVDIIQTEGGKCSNPTKYGVLGLIEKLIEIQLPRGFNDAVNGFVEDGWSLLGNDRIEDVTIAVNAVAGCSSGFACLTRSEWVDYGVDAYSAACFKATLYAVPCARTGGFPGTQWG | 219 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu10g00834 | 219 | Pfam | Protein of unknown function (DUF561) | 84 | 132 | IPR007570 | - | |
| Adu10g00834 | 219 | SUPERFAMILY | Cryptochrome/photolyase, N-terminal domain | 17 | 74 | IPR036155 | - | |
| Adu10g00834 | 219 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX32 | 135 | 170 | - | - | |
| Adu10g00834 | 219 | Gene3D | HUPs | 9 | 78 | IPR014729 | - | |
| Adu10g00834 | 219 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 | 181 | 217 | IPR044830 | GO:0003700 | |
| Adu10g00834 | 219 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 | 135 | 170 | IPR044830 | GO:0003700 | |
| Adu10g00834 | 219 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX32 | 181 | 217 | - | - | |
| Adu10g00834 | 219 | ProSiteProfiles | Photolyase/cryptochrome alpha/beta domain profile. | 1 | 87 | IPR006050 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu10g00834 | Adu-Chr10 | 11807806 | 11811142 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu10g00834 | 95 | 217 | Homeobox Transcription Factor Family | AT1G30490 | 38.854 | 2.16e-23 | 95.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu10g00834 | - | K09338 | aip:110268190 | 113.235 |