Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00832 ATGAAGAGAACTGGAAGCTCATCAGATTCTTTAGGACCTCTCATGACAATTTGTCCATCATCAACAGAGGAGCAGAGTCCGAGGAGCAACCACGTGTACGGGCATGATCCATTGTTCCAGTCGATGGTGCTTGATGGTCTAGACGAAGAAGGGTGCACGGTAGAGGAATCTGGGCACCACTCTGAGAAGAAGCGAAGACTTAGCGTGGAACAAGTGAAAGCGTTGGAGAAGAACTTCGAGGTTGAGAACAAGCTTGAACCAGAGAGGAAGGTGAAGTTAGCACAAGAACTTGGGTTGCAGCCTAGACAGGTGGCGGTTTGGTTCCAGAACCGCCGCGCCAGGTGGAAGACTAAACAGCTTGAGAGAGATTATGGCGTTCTTAAAAATAATTATGATGCTCTTAAAGTTAATCATGATGCACTAAAACAGGACAACGATGCGTTGCACAAGCAGGTACACACTACACACTAG 471 0.4735 MKRTGSSSDSLGPLMTICPSSTEEQSPRSNHVYGHDPLFQSMVLDGLDEEGCTVEESGHHSEKKRRLSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKNNYDALKVNHDALKQDNDALHKQVHTTH 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00832 156 Gene3D - 57 125 - -
Adu10g00832 156 SUPERFAMILY Homeodomain-like 52 120 IPR009057 -
Adu10g00832 156 MobiDBLite consensus disorder prediction 1 35 - -
Adu10g00832 156 Coils Coil 117 151 - -
Adu10g00832 156 Pfam Homeobox associated leucine zipper 118 153 IPR003106 GO:0006355|GO:0043565
Adu10g00832 156 PRINTS Lambda-repressor HTH signature 89 98 IPR000047 GO:0003677
Adu10g00832 156 PRINTS Lambda-repressor HTH signature 98 114 IPR000047 GO:0003677
Adu10g00832 156 CDD homeodomain 63 119 IPR001356 GO:0003677
Adu10g00832 156 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Adu10g00832 156 MobiDBLite consensus disorder prediction 1 28 - -
Adu10g00832 156 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 1 153 - -
Adu10g00832 156 SMART HOX_1 61 122 IPR001356 GO:0003677
Adu10g00832 156 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
Adu10g00832 156 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 153 IPR045224 GO:0003700
Adu10g00832 156 Pfam Homeodomain 63 116 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00832 Adu-Chr10 11766942 11767543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00832 1 152 Homeobox Transcription Factor Family AT4G40060 64.557 3.14e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu10g00832 Homeodomain 7.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00832 K09338 - fve:101309384 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g04131 03 130450420 130452882 Adu10g00832 10 11766942 11767543 PCT