LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu10g00821	ATGGCTCTAACAAATGCTTTTACTCAAAAGGTTGATCGTGTTGCAGACATCAATGCAACGAAACTGGCCTGGAATTTAGTTGTTGGAGTTGTTCATTTGTACGAAATTCCTAGCTCATGGAATCCCACAGATGTATGCAGCTTAGAATTGGTGCTCCAGGATGAAATGGGTGATCGTATACATTGCTCCATTCCGAAGGCAAATGTGGTGGTCTTTAAGATAGTTGTTCGTGAGTTTGGAATTTACTCAATGAGAAATTTCATTGTTCAGCCAAATTCAAAAGGTGTGAGGACAACTTCACACAAGTTCAAGCTAAGTTTTTATATGAAAACTTCTGTCAGTACTCTCTCCAGTGAGACCTTTCAATTGAATCCTTTCCGATTTGTCTCCTTTACTGAAATTGAAGAAGTTGATGTTGTCAATTTGAATATCCTCCTAGATTGTGTTGGTCACATTGTTGGAAAGGAGGATGTTAGACCAATGGTTACAAAATCAGGTCAAGAAAGTAAATGCATGGCACTATACCTGGAGGATCTTGAAAAAAATAAGATCAAGTGTACTATATTTGGTGAAATGATTGGTAAGTTAACTCCATTTATCAATAAGGATGATGGTGAGCCACTGATCTTGGTCGCTCAACTCTTCAAGCCAAATCAGTACCTCAATCAGATTAATATTCAGAATAGTCTTTATGCCTCGAGAGTGTTCCTGAACCCTGATTTTCCTGATGTTGTTGCATTCAAGAATCGCCTACTGAAAGAAAGTAACATTGGATCCCAACGAATTAATCACATAGAGACCCAACCTCAGTATTCTGTGAGTGATGAACTTTCGGGAGGTTCCTTTCCAATCAATACAATTGAAGAAGTTTTGAACATGACTTATGAAGTCTCCACTTGGGTTTTAGCCACTATAGTGTCTGTTGATGTTGGCACCCGCGATTGGTATTATGCCTCGTGTAAGAATTGTCCTAGAAAAGTTGTGGAGAATAAAGGTCGATATTACTGTGAGCATTGTCGAAAAGTGGGATTTAATGCTCCGTTGAGGTATCGACTTAATGTTGTAGTCACTGATGGGACTGGATGCATTAATAAAATGCTTTGGAATCAAGAGGCAAAGATCATTCTCGAAAAATCTGCTAATGACATAAGGGATCTAATGAAAGATGCTGATGAGAATGCCTGCTTAAAAGCTTTTGAACCTATAATTGATAGGAAGTTTCTTTTTAAATTGTCTATCTCACAGAAAAATCTGACCTCTGTGGACCAAGCTTATAATGCTGTTAAGATTAGTGATGATGAGGCACTGATTGATCTCTATTCATCCCACAGTTCTTCCATAGATATTGGAGGGGTTGAACAAGGCCTTTCAAATGTAGTGTCTACAACTGGAAATAATGACCTCGACTTAGATGGGAATGGAGCTGCTATTGTTTCACTATCAAAGGATTCTGGCATTGAGAGCATCTTTGAAAGCGGCTTAAATACTCCTGGTAAATATGTTATAGCAGATTCTGCTCCAAACTTGGGTGTTAGTGGACTTACTAATCCGGAAGGCCAGGGATCCAGTAACAAGACTTTCAAACGTGGATCTACCAAGAGAAAAATTGAAGCCGATGTCAATACGATTGGTCGTAGCAGAACCCTGTCTAGCTATTGGAACTGGGAGCTGGGGACCGAGGAGTTTGTCTTCAAGCATCTACATGCTGCTAAGAAGAGGCCAGCTTCCATTTATATTCACTTTGGTGTCAAGGGACGAAGATCATTGGGGAGTTGGGTTTTTAGATTTAATGTGGATACTGGTGAGAATGAACGCCTGCACATCCCATTCTTGAGGAACTCTCAGGGCCAATTCGAGGTGATCGGTACTGATAATGGCTGCATGGCCATTAGGTATTCATGCATTAGTCACCCAAGTAATCTCATCGTGTGGAATCCTAATACTGATCAGGTAACACGAATTTCGGATCCTATGCAACATCATTGTTGTATTTGTGCCTCCACTTATGCATTCCTGTACTTTCCTGATTCGGTTGGGTATGTGTGGATAAATATTTATAAGAAGAAAATTCTTGACTCACTATCATGGTTGACTTCATACTCATCAGTGACTGGCCATTGGGATAGTAATTTTTCCTGCCCTCCATATGTTCAGGGTGTTGATTCTAGGTATGTTGTTAACCATGGCATCGTTTATTGGTTGAATTGGAACAATCATGCACAGACAAGCCCACAGTGTATTGTTCACTTTTCAATTTTTACCAATCAGTTTGGATTCATTTTGATCCCTGTGGAAGCCAGAGCTATGATTCAGCGGCTTTTAATCTGTGAAGGTTGTTTGTATTATGCTGCTGTTCATGCTAAATCAGACAGTTATAGGTGGCTCATCTGGAAAATTGAAAAAGGCAATCAAGGATACTCCTGGGAGTTGTCATCTCAGTTTCGAGGTCATGGATCAGCAGAATCTCCAGAGTATTTGACTCATGATTATTTGATAACAGTTAAAGATACTTCTCAACCAACTAGAGGAACTCAGTTCACTATCACCAAGTTAGATACAAAAAATCAGCAGAGAAGAACACTTAAAGTGGTGGAATTCCCACTTTCTACGTATATTAAATCACTGAATTTGAATTTTAACACCATTGTCCCAGTTTAG	2658	0.3947	MALTNAFTQKVDRVADINATKLAWNLVVGVVHLYEIPSSWNPTDVCSLELVLQDEMGDRIHCSIPKANVVVFKIVVREFGIYSMRNFIVQPNSKGVRTTSHKFKLSFYMKTSVSTLSSETFQLNPFRFVSFTEIEEVDVVNLNILLDCVGHIVGKEDVRPMVTKSGQESKCMALYLEDLEKNKIKCTIFGEMIGKLTPFINKDDGEPLILVAQLFKPNQYLNQINIQNSLYASRVFLNPDFPDVVAFKNRLLKESNIGSQRINHIETQPQYSVSDELSGGSFPINTIEEVLNMTYEVSTWVLATIVSVDVGTRDWYYASCKNCPRKVVENKGRYYCEHCRKVGFNAPLRYRLNVVVTDGTGCINKMLWNQEAKIILEKSANDIRDLMKDADENACLKAFEPIIDRKFLFKLSISQKNLTSVDQAYNAVKISDDEALIDLYSSHSSSIDIGGVEQGLSNVVSTTGNNDLDLDGNGAAIVSLSKDSGIESIFESGLNTPGKYVIADSAPNLGVSGLTNPEGQGSSNKTFKRGSTKRKIEADVNTIGRSRTLSSYWNWELGTEEFVFKHLHAAKKRPASIYIHFGVKGRRSLGSWVFRFNVDTGENERLHIPFLRNSQGQFEVIGTDNGCMAIRYSCISHPSNLIVWNPNTDQVTRISDPMQHHCCICASTYAFLYFPDSVGYVWINIYKKKILDSLSWLTSYSSVTGHWDSNFSCPPYVQGVDSRYVVNHGIVYWLNWNNHAQTSPQCIVHFSIFTNQFGFILIPVEARAMIQRLLICEGCLYYAAVHAKSDSYRWLIWKIEKGNQGYSWELSSQFRGHGSAESPEYLTHDYLITVKDTSQPTRGTQFTITKLDTKNQQRRTLKVVEFPLSTYIKSLNLNFNTIVPV	885

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu10g00821	885	PANTHER	BNAC07G49340D PROTEIN	32	470	-	-
	Adu10g00821	885	CDD	RPA1_DBD_C	301	433	IPR013955	-
	Adu10g00821	885	MobiDBLite	consensus disorder prediction	512	527	-	-
	Adu10g00821	885	Pfam	Domain of unknown function DUF223	49	136	IPR003871	-
	Adu10g00821	885	Gene3D	-	120	257	IPR012340	-
	Adu10g00821	885	SUPERFAMILY	Nucleic acid-binding proteins	283	431	IPR012340	-
	Adu10g00821	885	CDD	RPA1_DBD_A_like	26	113	-	-
	Adu10g00821	885	Gene3D	-	8	115	IPR012340	-
	Adu10g00821	885	Pfam	Replication factor-A C terminal domain	303	420	IPR013955	-
	Adu10g00821	885	SUPERFAMILY	Nucleic acid-binding proteins	130	251	IPR012340	-
	Adu10g00821	885	PANTHER	REPLICATION FACTOR A 1, RFA1	32	470	IPR004591	GO:0003677\|GO:0005634\|GO:0006260\|GO:0006281\|GO:0006310
	Adu10g00821	885	MobiDBLite	consensus disorder prediction	512	531	-	-
	Adu10g00821	885	Gene3D	-	273	439	IPR012340	-
	Adu10g00821	885	CDD	RPA1_DBD_B_like	147	251	-	-
	Adu10g00821	885	SUPERFAMILY	Nucleic acid-binding proteins	13	117	IPR012340	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu10g00821	Adu-Chr10	11301405	11310239	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu10g00821	6	429	Core DNA Replication Machinery Family	AT5G08020	22.748	3.35e-12	68.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu10g00821	-		-	ahf:112718168	904.434