Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00816 ATGACGACAATCTCTGCTTTACGCTTGTCAAACTCGATCTCTCATCCAACAATTTTACGGGTCCAGTTTCCAACGAGTTCACGTCTTGCTCGTCTCTCGTCTCTCGTCTCGTTGGATATATTGTCTAACAGATTCTTCGTTCGAAGGATTGTTTCCGGAGTCATTGGCAGAGATGGTGTGTTTGGAATCGTTGGATCTGAGTTCAAAAACTTCTATGTTGAAGAAGATTACGCATTAACAACAATGGGTCTCTCAAATTACCCGTATGCTGCTGAAGGGGTGATACCTTTAATTGTGATGAACACGGTTATGTCTGTTGCTATATTGAAGAACATGTTTAGATCGGTGCTTCAAGCTGTTGGTGCCACCAGTTCTTCAGATACCGCTTCTTCAGATTACCCAACATATATTAGCATGTTTGAAGACACAACATCATGTGAAAGTTCGGGTTGTTCTAGGCCAAGAAGGGTGTCCATAACACAGTACAAGTCATTGTGCCACAACAACAATAATAAGAGTGTTATGTTGGAGTGTTGCGTGTGCCTCACAGGGTTCGAAGCGAATCAAGAGGTTAGCGAGTTGCCTTGCAAGCATTTCTTCCACACAAGCTGCTTAGACAAATGGTTTGACAACTGGCACACCACTTGCCCTTTGTGCCGTTCGTTCTCCTAG 672 0.436 MTTISALRLSNSISHPTILRVQFPTSSRLARLSSLVSLDILSNRFFVRRIVSGVIGRDGVFGIVGSEFKNFYVEEDYALTTMGLSNYPYAAEGVIPLIVMNTVMSVAILKNMFRSVLQAVGATSSSDTASSDYPTYISMFEDTTSCESSGCSRPRRVSITQYKSLCHNNNNKSVMLECCVCLTGFEANQEVSELPCKHFFHTSCLDKWFDNWHTTCPLCRSFS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00816 223 SUPERFAMILY RING/U-box 177 221 - -
Adu10g00816 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 222 IPR013083 -
Adu10g00816 223 CDD mRING-H2-C3H2C2D_ZSWM2 177 220 - -
Adu10g00816 223 PANTHER F21J9.24-RELATED 82 222 - -
Adu10g00816 223 Coils Coil 222 223 - -
Adu10g00816 223 SMART ring_2 178 219 IPR001841 -
Adu10g00816 223 ProSiteProfiles Zinc finger RING-type profile. 178 220 IPR001841 -
Adu10g00816 223 PANTHER - 82 222 IPR044249 -
Adu10g00816 223 Pfam Ring finger domain 177 220 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00816 82 221 C3H Transcription Factor Family AT2G04240 35.811 9.30e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00816 K16285 - gmx:100811790 172.94