Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00783 ATGGGAAAGAAAGGTGGATTGTTTCGTTATGCTGATGGAGTTGACAAATTGCTATTGTTGTTTGGGACTATGGGTTGCATAGGGGATGGGCTACAAACACCTATCACAATGTTTGTTTTTGGGAGTTTGATTGATGATTATGCACGTGGTTCTGGAGATTCTGTTCCTAAGCATATCATAGACAAGTACGCTCTCAAGTTGCTGTATATTTCCATCGGGGTTGCTGTATGTGCTTTTGTTGAAGCAGTATGTTGGACAAGAAGTGCAGAAAGACAAAGTTGTCGCATGAGAATTGAATATCTTAAATCAGTTCTGAAACAAGATGTTGGCTTCTTTGACAAGCAAACCGATAGTGATTCTTCAAAGACCTTCCAAGTAATTTCTACCATAACTTCTGATGCCCAAACAATCCAAGACACCATGGCTGATAAGATACCGAACTGTCTAGTTCACCTGTCAGCATTTTTTTCTAGCTTCATAGTAGGACTCTTCCTCTCATGGAGGCTTGTAATAGCTGCATTTCCATTCTCAATAATGATGATCATGCCAGCAATCATATTTGGGAAGGCAATGAAAGATCTTGGGGAGAAAATGAAGGATGCATATGGCATAGCAGGGAGCATAGCGGAACAAGCTATCTCGTCGATTCGAACGGTTTATTCATATGTTGCCGAGAAAGAAACACTAAAGAGGTATAGCTCTGCTCTTGAAAGGAGTATGGAGCTGGGAATAAAGCTAGGGAGAACAAAGGGTGTTGTAGTTGGTAGCTTTGGGTTGCTTTATGCTACTTGGGCATTTCAATCTTGGGTTGGAAGTGTTGTGGTTAGGACTAAAGGTGAAAGAGGTGGACTTGTGTTTGCTGCTCAAATTTGCATGATTTGGGGAGGACTGTCTCTGATGAATGCACTTCCAAATCTAACTTTCATTGTAGAGGCAAAAGTAGCAACAACCAGAATTTTCCAAATGATTGAGCAAATACCAATCATAAACTCTCACAAACAAAAAGGAAGGATCTTAAGCCATGTGAGAGGAGAAATCACATTCACAAAAATTGACTTCACTTACCCACCACGACCGGACACACCGATTCTCCAAGGACTGGATCTGAAGTTTCCAGCATGTAAAACAATAGGCCTAGTTGGAGGCAGTGGTTCTGGAAAATCCACAATCATCTCTTTGATTGAAAGATTCTATGATCCTTTATATGGTGAGATATTGCTTGATGGACATGATATAAAGAGGCTTGAGCTTAAGTGGCTAAGGTCACAAATGGGACTTGTTAATCAGGAGCCTATTCTGTTTGCAACATCAATTAGGGAGAATATTCTGTTTGGCAAGGAAGGTGCTTCAATGGAAGCTGTTATAAATGCAGCTAAGGCTGCAAATGCACATGGTTTCATTGTTAAACTTCCTAGTGGATATGAAACTCAAGTGGGACAACTTGGGACTCAGTTATCTGGAGGACAAAAGCAAAGAATTGCAATAGCAAGGGCCCTAATTCGCAACCCGAAAATCCTACTCCTTGATGAAGCCACAAGTGCATTGGATTCAGAGTCTGAAAGAATAGTGCAAGAGGCCCTTGATTTGGCTTCAAGAGGCAGAACAACAATCATTGTAGCTCATCGCATATCGACGATTCGAAATGCTGACTCGATAGTAGTCCTTCAATCAGGAAGAGTTGTTGAATCTGGCTCCCATGTTGAGCTACTCAAACTTAACAATGGACAAGGGGGTGCTTATAGCAAAATGCTAAAACTACAACAAACAAATCAAAATGAAGATTCAACATTGAATGATGTGAGCAAGAGTCCCCAAGTTATGTCATATTTAACAAGTCCAAGATCAATGCCAGTTACTCCAACTCATCATTCATTCACCTCACCGACACCAATATACTCAATCAGTGTTCTGGGGTCCCCTTTTGATGACTACTCTGAGAATTCTGAGATTTCTTCAAAAGCAAGTTTCTCGCAATGGCGTTTGATAAGAATGAATTCCCCTGAGTGGAAGTATGCTCTGATAGGATGCTTAGGTGCTATTGGCTCTGGAATTTGCCAACCTTTTTACTCTTATTGCCTTGGATTCATTGCTTCTATCTACTTTATAACCGATCACTCGCGCATCGTCTCACAAATCAGGCTGTACTCATCAATTTTCTGCATCATAGCAGTTGTCAACTTCATATCAGGCCTAATTCAGCACTCGAGCTTCGCCATCATGGGCGAGAAATTGCTAAAGAGGGTGCGCGAGAATCTGCTAGAGAAAATCCTTACATTTGAAATAGGATGGTTTGATCAAGAAGATAACACCAGTGCAGCCATCTGCGCTCATTTGGCGTTCGATGCAAACTTGGTCAGGTCTCTTGTAGCAGAAAGAATGTCATTACTAGTTCAAGTATTTGTCACTGCCACCCTGGCTTTCGCACTCGGTTTATATGTCTCATGGAAGGTGGCAATGGTAATGATAGCTATGCAGCCCTTGATCATTGCTTGTTTCTATTCCAAATTCATGCTTATGAAAAGTATGTCAGGTAAAGCAAGAAAGGCTCAAAGTGAAGGTAGTCAATTAGCAATGGAAGCTACCATTAACCATATAACTATTGCTGCATTTTCATCAGAGAAAAGGGTATTGAATTTGTTCAAAAATTCAATGAAAGGACCTCATTTGGAAACCGTAAAGCAATCATGGATTTCAGCTGCAATTTTGTCATTGTCACAGTTCATAACTACAGCTTCTATAACCTTAACATTTTGGTATGGAGGATTGCTGCTAAACAAAAAGATGGTGAATTCAAATGACCTTTTGCAAGTTTTCTTAATACTGATGGGAACTGGAAGACAAATTGCTGAGACAGTAAGCATGACTTCGGACATAGCGAAAAGCGGGAAAGCCGTTAGCTCGATTTTTGCAATTTTGGACAGGAAAACTCAGATTGAACCTGAAGATCTTAGGCTTATGAAGTTCAGAAAGAACAACAACATAAAGGGTCATGTGAAGTTAAAAGATGTGTTCTTTTCATACCCATCAAGGCCAGAACAAATGATCCTAAAGGGTCTTAGTCTTGAAATTGAAGCTGGGAAAACAATTGCATTGGTGGGACAAAGTGGGTCAGGGAAATCCACTATCATTGGACTAATTGAAAGATTTTATGACCCAATTAATGGATCAATATTTATAGATGGTTGTGACATTAGGGAATTTGATTTGAGAAGTTTGAGGTTACATATTGCATTGGTGAGTCAAGAGCCTACACTCTTTGGTGGAACTATACGTGATAACATTGTGTATGGAAAGATTGATGCATCTGAAGATGAAATAAGAAAGGCAGTGCGTCTTGCAAATGCTCATGAGTTTATAAGTTCAATGAGAGATGGATATGACACATACTGTGGAGAAAGAGGAGTGCAGCTTTCAGGGGGACAAAAGCAAAGAATTGCAATTGCCAGAGCAATACTAAAGAACCCATCAATCCTTCTCATGGACGAAGCAACAAGTGCTCTCGACAGCGTTTCAGAGAATCTAGTGCAAGATTCCCTGGAGAAAATGATGGTTGGAAGAACATGTGTGGTTATTGCTCATCGTTTGTCTACAATTCAGAATGTGGACACCATTGCTGTGATCAAGAATGGGAAATTGGTGGAGCAAGGTTCACACTCCGAGTTAATGAATGTTGGAACAAAGGGTGCTTACTACTCCATGATTAGGTTACAACATGGGACTAACTCTACTAGCTGA 3735 0.4043 MGKKGGLFRYADGVDKLLLLFGTMGCIGDGLQTPITMFVFGSLIDDYARGSGDSVPKHIIDKYALKLLYISIGVAVCAFVEAVCWTRSAERQSCRMRIEYLKSVLKQDVGFFDKQTDSDSSKTFQVISTITSDAQTIQDTMADKIPNCLVHLSAFFSSFIVGLFLSWRLVIAAFPFSIMMIMPAIIFGKAMKDLGEKMKDAYGIAGSIAEQAISSIRTVYSYVAEKETLKRYSSALERSMELGIKLGRTKGVVVGSFGLLYATWAFQSWVGSVVVRTKGERGGLVFAAQICMIWGGLSLMNALPNLTFIVEAKVATTRIFQMIEQIPIINSHKQKGRILSHVRGEITFTKIDFTYPPRPDTPILQGLDLKFPACKTIGLVGGSGSGKSTIISLIERFYDPLYGEILLDGHDIKRLELKWLRSQMGLVNQEPILFATSIRENILFGKEGASMEAVINAAKAANAHGFIVKLPSGYETQVGQLGTQLSGGQKQRIAIARALIRNPKILLLDEATSALDSESERIVQEALDLASRGRTTIIVAHRISTIRNADSIVVLQSGRVVESGSHVELLKLNNGQGGAYSKMLKLQQTNQNEDSTLNDVSKSPQVMSYLTSPRSMPVTPTHHSFTSPTPIYSISVLGSPFDDYSENSEISSKASFSQWRLIRMNSPEWKYALIGCLGAIGSGICQPFYSYCLGFIASIYFITDHSRIVSQIRLYSSIFCIIAVVNFISGLIQHSSFAIMGEKLLKRVRENLLEKILTFEIGWFDQEDNTSAAICAHLAFDANLVRSLVAERMSLLVQVFVTATLAFALGLYVSWKVAMVMIAMQPLIIACFYSKFMLMKSMSGKARKAQSEGSQLAMEATINHITIAAFSSEKRVLNLFKNSMKGPHLETVKQSWISAAILSLSQFITTASITLTFWYGGLLLNKKMVNSNDLLQVFLILMGTGRQIAETVSMTSDIAKSGKAVSSIFAILDRKTQIEPEDLRLMKFRKNNNIKGHVKLKDVFFSYPSRPEQMILKGLSLEIEAGKTIALVGQSGSGKSTIIGLIERFYDPINGSIFIDGCDIREFDLRSLRLHIALVSQEPTLFGGTIRDNIVYGKIDASEDEIRKAVRLANAHEFISSMRDGYDTYCGERGVQLSGGQKQRIAIARAILKNPSILLMDEATSALDSVSENLVQDSLEKMMVGRTCVVIAHRLSTIQNVDTIAVIKNGKLVEQGSHSELMNVGTKGAYYSMIRLQHGTNSTS 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00783 1244 SUPERFAMILY ABC transporter transmembrane region 7 325 IPR036640 GO:0005524|GO:0016021
Adu10g00783 1244 CDD ABC_MTABC3_MDL1_MDL2 998 1237 - -
Adu10g00783 1244 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 319 - -
Adu10g00783 1244 Pfam ABC transporter 1016 1165 IPR003439 GO:0005524
Adu10g00783 1244 Pfam ABC transporter 364 513 IPR003439 GO:0005524
Adu10g00783 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 337 587 IPR027417 -
Adu10g00783 1244 CDD ABC_MTABC3_MDL1_MDL2 346 587 - -
Adu10g00783 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 346 582 IPR003439 GO:0005524
Adu10g00783 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 673 960 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g00783 1244 Gene3D - 984 1242 IPR027417 -
Adu10g00783 1244 SUPERFAMILY ABC transporter transmembrane region 660 979 IPR036640 GO:0005524|GO:0016021
Adu10g00783 1244 ProSitePatterns ABC transporters family signature. 1137 1151 IPR017871 GO:0005524
Adu10g00783 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 311 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g00783 1244 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Adu10g00783 1244 Gene3D ABC transporter type 1, transmembrane domain 7 964 IPR036640 GO:0005524|GO:0016021
Adu10g00783 1244 ProSitePatterns ABC transporters family signature. 485 499 IPR017871 GO:0005524
Adu10g00783 1244 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 11 1239 IPR039421 -
Adu10g00783 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 992 1237 IPR027417 -
Adu10g00783 1244 SMART AAA_5 373 559 IPR003593 -
Adu10g00783 1244 SMART AAA_5 1025 1211 IPR003593 -
Adu10g00783 1244 Gene3D - 336 588 IPR027417 -
Adu10g00783 1244 PANTHER OS04G0481700 PROTEIN 11 1239 - -
Adu10g00783 1244 Pfam ABC transporter transmembrane region 673 941 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g00783 1244 Pfam ABC transporter transmembrane region 22 277 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu10g00783 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 998 1234 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00783 Adu-Chr10 10464543 10474973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00783 674 1244 Calmodulin-binding Proteins AT2G36910 37.326 1.71e-110 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00783 K05658 - gmx:100804664 1898.63