Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00736 ATGTCAAACATGCTTAAGCGCAAATTAGAGGAGGAGCAACCTATCATGGATAATAATAATAATAATAATAATAATCCAGAGTTGTTGCTTACTCTGAGCCTCAACCTGGAAAGGGTTGATGAACCATCTTCCAATATGGAAAATCGCCCTAAGCAGCAACGATTATTTCCTTGCAAATTCTGTTACAAGAAGTTTGCGAGTTCTCAAGCTTTGGGAGGACATCAAAATGCTCACAAGCGCGAGAGGATGCTCTCAAGAATGAACAAAGTGTTTAACATGGGAGCCATTGACCTTGGTCCTCGTCACTTCTGTCCTTACTCAAACATGTCAAATCATCTTATTCCCTTTCGTGGGTCATTTCCTGTTTATCATCAAGGTGCACACATGCACCACATGGTTCATATGCCTTCTTCCACCTTGACCATGCCTTTTCCTCGTTTTGGATCTAACTTTGGAAACTGA 462 0.4113 MSNMLKRKLEEEQPIMDNNNNNNNNPELLLTLSLNLERVDEPSSNMENRPKQQRLFPCKFCYKKFASSQALGGHQNAHKRERMLSRMNKVFNMGAIDLGPRHFCPYSNMSNHLIPFRGSFPVYHQGAHMHHMVHMPSSTLTMPFPRFGSNFGN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00736 153 SUPERFAMILY beta-beta-alpha zinc fingers 53 83 IPR036236 -
Adu10g00736 153 Gene3D Classic Zinc Finger 40 93 - -
Adu10g00736 153 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 17 143 IPR044246 GO:0009788
Adu10g00736 153 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Adu10g00736 153 Pfam C2H2-type zinc finger 56 80 - -
Adu10g00736 153 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00736 Adu-Chr10 9232667 9233134 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00736 52 152 C2H2 Transcription Factor Family AT5G10970 38.614 2.97e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu10g00736 zf-C2H2_6 1.2e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00736 - - aip:107620206 279.641