Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00688 ATGACCACCCGTCGTTGTTACCATTGCGGACTGAAGGTCCTCTGGTCGTTCTGGTCTTCTGGTTCTCTAGTCGTTGTCTGGTCCTCTAGTCGTCGTGGGAAGCATAGTTTGAAGGTTTCATCATCGTGGACATCTATTCTGTTGTCATCATCGTCGTCGAACATCTCTTCTGTTGCTGTGAAGTACTCCAGAGAACCCGAAAATCCCACTAAGTCTTGCAAGGCTAGAGGCTCTGATCTTAGGGTTCATTTCAAGAATACAAGGGAGACTGCCTTTGCAATCAGGAAGCTGCCCCTTGTTAAGGCAAAGAGGTACCTGGAGGATGTTCTGGCCCACAAACAGGCTATTCCATTCCGACGCTTCTGCGGTGGTGTTGGGAGGACTGCCCAGGCCAAGAACAGACATTCCAATGGACAAGGACGCTGGCCCGTGAAATCAGCTAAATTCATTCTTGATTTGCTCAAGAATGCTGAGAGCAATGCTGAGGTGAAAGGTTTGGATGTGGATGCTCTTTACATTTCTCATATCCAGGTTAATCAAGCACAGAAACAAAGGCGCCGCACCTACCGAGCTCACGGAAGAATCAATCCTTACATGTCATCACCATGCCACATAGAGTTGATTTTATCTGAGAAGGAAGAGCCTGTCAAGAAAGAGCCGGAGACCCAGCTGGCAACAAGCAAAAAGAAGTCTCAAGCTATTCGTAGTGGTGCTTCATCCTAA 723 0.4786 MTTRRCYHCGLKVLWSFWSSGSLVVVWSSSRRGKHSLKVSSSWTSILLSSSSSNISSVAVKYSREPENPTKSCKARGSDLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATSKKKSQAIRSGASS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00688 240 Pfam Ribosomal protein L22p/L17e 75 210 IPR001063 GO:0003735|GO:0005840|GO:0006412
Adu10g00688 240 PANTHER 60S RIBOSOMAL PROTEIN L17 60 240 IPR005721 GO:0003735|GO:0006412|GO:0015934
Adu10g00688 240 MobiDBLite consensus disorder prediction 226 240 - -
Adu10g00688 240 Hamap 50S ribosomal protein L22 [rplV]. 58 212 IPR005721 GO:0003735|GO:0006412|GO:0015934
Adu10g00688 240 PANTHER 60S RIBOSOMAL PROTEIN L17-2-LIKE 60 240 - -
Adu10g00688 240 ProSitePatterns Ribosomal protein L22 signature. 185 209 IPR018260 GO:0003735|GO:0005840|GO:0006412
Adu10g00688 240 MobiDBLite consensus disorder prediction 212 240 - -
Adu10g00688 240 SUPERFAMILY Ribosomal protein L22 60 212 IPR036394 GO:0003735|GO:0005840|GO:0006412
Adu10g00688 240 CDD Ribosomal_L22 73 209 IPR001063 GO:0003735|GO:0005840|GO:0006412
Adu10g00688 240 Gene3D Ribosomal protein L22/L17 59 239 IPR036394 GO:0003735|GO:0005840|GO:0006412
Adu10g00688 240 TIGRFAM uL22_arch_euk: ribosomal protein uL22 62 212 IPR005721 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00688 Adu-Chr10 8260180 8262544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00688 60 240 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 86.740 3.44e-115 325