Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00620 ATGGCGAAAGTAGCAGCAGCCTTGAATGACAAGCATAATGTGCTTGACATTCTGAGTTCATTTCGTGGAACTCTTAGTATTGAAGCCTCAAATTATCCAACTACAGGAGGAGAGAAGGAACTTCGAAAACATGTTTGTCAGCTACTTCAGCTTTCAATGATTGAAGACGATGAAGTTTTGTGCACCAGACACATTGAGGAAGAGATGTCAAGCAGCAGGTACCTAGTAATTCTTGCAGACAGGGATGGCGAGGAAATTGTCGATCTACAAAGAGTGGGATTTTGTAAGAGTCTACTGTCAGGAGTTTTGGTACTCATTACCACTGATTCACCAGCACCTCAACATGCTAAAGAAGAAGGATTGATGGAAGCCATAGTGGACTTGGAAATTCGGACTAAAGAACATTTGCTGCCATGGGTGGTCTTCTGTCACAATGCGGGGAAGGATTTTGTATATTCATCAAGTGCCATCCTGACAACTGCAGTGCGCATAGTTGAGGAGTGTCGAAGCCACCTTCACGCAATTCTCCTTGTGGCAAAGTGGTTGAAGAATCATCAAGATGTCAGAAAGTGGGAACTTGCTCTCCTCAAATTGCAATCTGGTAATCCTTCACAAGATATCCACAATTTTCATGGTTTAAACGAGATCATGGTTAACACATTCCTAAACTTAATATGGGATGGCATGAATAAGACACAACAGAATTGCCTACTGAGCTGTATAGTCATCCCTAAAATTAGAGATGGCATGGTTGATCATGAATTGATGAATCACTGGATGTCTTCTCTCTTTGTGGATGCTGGAGAAACAGAAAAGAACCTAAGACAACTTGTAGAAAATTCTGTCTTTCTTCAATTTGATGGTGTTGGAGGCGGGTATACTTGGTTACCAGAAGAAACCTATCAAATGTTAGAACGGCTATACAGCTCATACCCATTGTTCATAGAGAAATCAAACCTAGGGTTGACTGAACCACCCAACCCTGACAAATGGAATAATGCCTTACGAATTGAATTAGCAGGCAATAAAATCTCTGAGTTACCAAAGTCCCCAGCTTGTCTGGAACTCAAAGTTTTGATGCTGCAAAGCAATGCTGATTTGACAAAAATACCATCTTCATTTTTTGGTCAGATGCCACTGCTTTGCATCCTGAACTTATCCTACACTAGTGTAAGAGAACTGCCATCTTCATTGTTTTTTCTGGAGCAGCTTAGAGAACTGTATCTGAAAGGTTGTGAATGCTTCATGAAGTTACCACCTGAAATTGGAAATTTGGAGAAGCTTGAGAAGCTTGATCTTGATGAGACTCAGATCACACATCTGCCAAAAGAGGTCCAGAAGTTAACCAATATGCAAAGTTTGACCCTCTGCTTTTATGAATATCGTGTCAAGAAGAACATGCCATATTCTTGCTCAACAATTATTCCTTCTGGCGTGCTATCTAAACTCAAGAGGTTGGAACATTTGTGTATTGGTGTAAACCCTGATGATGAGCGGTGGGATGAGAATCTGCAAGTTATTCTACCAGAAATATTGGGATTAGAGTGTTTGCAAACTCTCAGTATGTATATCCCACAACCGGAACTTTTGAAGCTCATACCGGCCCACATTTTTGAGCTTGATTTCAGGTTCATTGTTGGTCGTCATATGCAGCGGATTATATCAAGCATACCACCTGCCACTGATGTGAAATTTAAACAAAGTGACTGCAGCTTAAAATTTGTAAAAGGTGAGGGTGTGCCAGATGAAATCAAAACGGTTCTTAGACACAGCAAGGCTCTTTTCTTGGATAGGCATTTCACCTTGAAGAGTCTTTCTGAATTTGAAATGAAAAATTTAGACCAACTAAGGGTGTGCATATTGGCAGAATGCAAAGAAATGCAGACATGTGGAGGTGGAGCAAAAGATGAAGATGACATGCTTCCGCATTTGCTATTCTTGAGTATATTCCACATGAAGAATCTGAGAAGCATATGGGAAGGCCCAACTTCCCCTCACTCCTCATTTGGTATGTTACAGTCTTTGTCTTTGCAAAGTTGTCCCAGGTTGGTGACTCTCTTCTCTTTGGACTTTCTGGGAAATCTTTCTTTGTTGAAGAAACTTATAGTGAAGGACTGCCCCAAATTAAGTACATTGATAAGTCATGAATCATCCAAGCGCAATGCACATGCTTTCCTCCCTAAATTGAGCAAGTTATTGCTTCTCCATCTTCCTGAATTGTCCAGCATTTCAAATGGGTTGCAAATTGGGCCTGGTTTAAAAGAAATAGCATTTTATGACTGTCCAAAGCTGCACAGTCTTTCAAGGAAGGAATTGGTAAGCAAAGAACTAACGGCAATAAAAGGAGAAACCAACTGGTGGAAGTCACTAGAAGGTCGAACGCCTAATTTTAATCTAATTTTTTCCCCAATTAATGAAGAGGCTGACTTGATGACTCAGTTAGGTATATGTGACGATGACGGTATTGATAATGGTCCAGGTGACTCAGTAGGTAAGCCGTCACAGCCTACAGGGATTGCAACTTGTGTATCAAATTCACCGACTAGGAGAGGCAAATATAGAAGGCGTAGAATCTCAAAAACTTGGGAGGTAGAGACAAGTTATCTCACTGAAGATGGATACGCATGGAGAAAATATGGTCAGAAATCGTTGTTCAACAATAAGTACCTGAGACATTATTACAGATGCACTCATAAGTATGATCAAGGATGCCTGGCCACAAAGCATGTTCAACGGATTGGCGAGGACCCTCCTTTATATAAAACAGTTTACTCTGGGCAACATACATGCCGCCGTAGACCCTGCCATTCTGATCCCATTAAGTACACCAAGGAGCTCAGCTTCTTGTGGTTGGCAGCACCTTATTTTAGCCATGAAGCCACCAATCCATCCCCGCTACTGGTTCTGAAAATTCAACCACAACCTGCCCTGCTATCCTCTCCCTGA 2946 0.4138 MAKVAAALNDKHNVLDILSSFRGTLSIEASNYPTTGGEKELRKHVCQLLQLSMIEDDEVLCTRHIEEEMSSSRYLVILADRDGEEIVDLQRVGFCKSLLSGVLVLITTDSPAPQHAKEEGLMEAIVDLEIRTKEHLLPWVVFCHNAGKDFVYSSSAILTTAVRIVEECRSHLHAILLVAKWLKNHQDVRKWELALLKLQSGNPSQDIHNFHGLNEIMVNTFLNLIWDGMNKTQQNCLLSCIVIPKIRDGMVDHELMNHWMSSLFVDAGETEKNLRQLVENSVFLQFDGVGGGYTWLPEETYQMLERLYSSYPLFIEKSNLGLTEPPNPDKWNNALRIELAGNKISELPKSPACLELKVLMLQSNADLTKIPSSFFGQMPLLCILNLSYTSVRELPSSLFFLEQLRELYLKGCECFMKLPPEIGNLEKLEKLDLDETQITHLPKEVQKLTNMQSLTLCFYEYRVKKNMPYSCSTIIPSGVLSKLKRLEHLCIGVNPDDERWDENLQVILPEILGLECLQTLSMYIPQPELLKLIPAHIFELDFRFIVGRHMQRIISSIPPATDVKFKQSDCSLKFVKGEGVPDEIKTVLRHSKALFLDRHFTLKSLSEFEMKNLDQLRVCILAECKEMQTCGGGAKDEDDMLPHLLFLSIFHMKNLRSIWEGPTSPHSSFGMLQSLSLQSCPRLVTLFSLDFLGNLSLLKKLIVKDCPKLSTLISHESSKRNAHAFLPKLSKLLLLHLPELSSISNGLQIGPGLKEIAFYDCPKLHSLSRKELVSKELTAIKGETNWWKSLEGRTPNFNLIFSPINEEADLMTQLGICDDDGIDNGPGDSVGKPSQPTGIATCVSNSPTRRGKYRRRRISKTWEVETSYLTEDGYAWRKYGQKSLFNNKYLRHYYRCTHKYDQGCLATKHVQRIGEDPPLYKTVYSGQHTCRRRPCHSDPIKYTKELSFLWLAAPYFSHEATNPSPLLVLKIQPQPALLSSP 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00620 981 SUPERFAMILY L domain-like 318 768 - -
Adu10g00620 981 SMART LRR_typ_2 425 447 IPR003591 -
Adu10g00620 981 SMART LRR_typ_2 378 401 IPR003591 -
Adu10g00620 981 Gene3D Ribonuclease Inhibitor 581 781 IPR032675 -
Adu10g00620 981 Gene3D Ribonuclease Inhibitor 324 545 IPR032675 -
Adu10g00620 981 Pfam WRKY DNA -binding domain 871 931 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu10g00620 981 SMART WRKY_cls 870 932 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu10g00620 981 Gene3D WRKY domain 858 933 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu10g00620 981 Pfam Leucine rich repeat 355 412 IPR001611 GO:0005515
Adu10g00620 981 SUPERFAMILY WRKY DNA-binding domain 866 931 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu10g00620 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 240 IPR027417 -
Adu10g00620 981 ProSiteProfiles WRKY domain profile. 865 928 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu10g00620 981 PANTHER PROTEIN LAP1-LIKE 186 801 - -
Adu10g00620 981 PANTHER - 186 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00620 Adu-Chr10 6938478 6942377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00620 800 930 WRKY Transcription Factor Family AT3G56400 40.000 1.05e-25 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu10g00620 WRKY 1.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00620 - - adu:107468800 1865.51