Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00617 ATGAGCAAAGTAGGTGATTCTACCAAAATGAAGTCAGAGGCAGGTGAGTTTCCCAAAATGGAAATGAAGCCATTCAATATCCTTAAAACAGATATGAATGAACTTCTGAAAAACAAGACGGCTGATTTTTTTGACAAAACAAAATCTGAAGGGGCCTCAGCTTCTCAGACTAGTACTTTGACGAGCTTGAAATCAACAAATTCCTCACTTGTATCAAAAAATAGTTTGAGGAGGAAGAGGGATTTGATGAGCCTGTTGTGTAGTTATCCTCTGGACGCAAGAATGATATCCGATGACTTCAAATCAAAACCATATGACGAGAGACAGCTGCCACTTAAACTAAAAGGACTTCTTCCAAAGGAGATAATAAGGGATGCTGAAAATGGTGATAGGTCCTGGTCCTGGTCCGGCTCCAGCTTCGGTGATGCCCACTTGGACTTCATTCCAGAAGCTATTCTCAATCTGGCTGCTGATCTTTCTGTTCACCAACTCATCCAAACATTGATTTCCATTTGTAAAAGTGAAAATCCAAACCATACAAAATGCATCAGGTTATCAACCAGAAGTGATGTTGAAAAAAGAACAGTCGAGGCAAAAGTAACTGCAGCCTTGAATGACAAGCATAATATGCTTGACATTCTTAATTCATTTCGCAGACCTCTGACTATTGATGCCTCCGGATATCCAACTTCAGAAGCAGAGAACGAACTTAAACAACATATCTGTCAACTACTTCAGCTTTCAACTATTGAAGATGATGACATTCTGTGCACCAGACAGATTGAAGATGAGATGTCAAGAAGCAGGTACCTAGTAATTCTTGTAGATAGGGATGGTGAGGAAATTGTTGATCCACAAAAAGTGGGACTTTGTAGTACTCTACAGTCAGGAGTTTTGGTCCTCATTACAACTGACTCACCAGCATCTCAACAAGCTAAAGAAGGAGGATTGACGGATGAGTTAGTGGACTTGGAAATCCGGACTAACGATCATTTGCTGCCGTGGGTGGTCTTCTGTCACAGTGTGGGGAAGAAGTTTGTATATTCATCAAGTGCCATCCTGACAACTGCAGCGCACATAGTTGAGGAGTGTCGCAGCCACCTTCATGCAATTCTCCTCGTGGCAAAGTTGTTGAAGAATCATCAAGATGTTAGAAAATGGGACCTTGCTCTCTTCAAATTGCGATGTTTTAATCCTTCACATGATTTCCACAATTTTCATGGTTCGAACAGCATCATGATTAAGGCATTCCTAAGCTTAATATGGGATGGCATGAAGAAGATACAACAGAATTGTCTACTTAGTTGTTTAGTCATTCCCAAAATTCAAGAAGGCATGGTTGATCATGAATTGATGAATCACTGGATGTCTTATCTCTTTTTGGATGCTGGAAAAACGGAAAAGAACCTAAGTCAGCTTGTAGAAAATTCTATATTTCTTCAATTGAATGGTGTTGGAGGCAGGTATATTTGGTTAACAGAAGAAACCTATCAAATATTAGAACGGCTACACACCTCTTACCCGTTGTTCATAGAGAAATCAAACCTAGGATTGACTGAACCATCCAACACTGACAAGTGGCATAATGCTGTACGAATTGAATTAGCAGGCAATAAAATCTCTGAGCTACCACAGTCCCCAGATTGTCTGCGACTCAAAGTTTTGATGCTGCAAAACAATGCTGATTTGACAAAAATACCATCTTTATTTTTTGATCACATGCCTCTCCTTTGCATACTGAACTTATCCTATACTAGTGTAAGAGAACTGCCGCGTTCGCTGTTCTTTTTGGAGCAGCTTAGAGAACTTTATTTGAAAGGTTGTGAATGCTTCATGAAATTACCACCTGAAATTGGAAATTTGAAGAAACTTGAGAAGCTTGATCTTGATGAGACTCAGATCACACATCTGCCAAAAGAGGTCCAGAAGTTAACCAATATGCAAAGCTTGACCCTCTGCTTTTATGAATATCGTGTCAAGAAGAATAGGTCATATTCTTGCTCAACAATTATTCCTTCTGGTGTGCTATCTAAACTCAAGAGGTTAGAACATTTGTGTATTGGTGTAAACCCTGATGATGAGCGGTGGAATGAGAATGTGCAAGCCATTCTACCAGAAATATTGGGATTAGAGTGTTTGAAAACTCTAAGTATGTATATCCCACAACTGGAACTTTTGAAGCTCATACCGGCCCACATTTTTAAACTTGATTTCAGGTTCACTGTTGGTCGTCATATGCAACGGATTATATCAAGCATACCACCTGCCACTGATGTGGAATTTAAACAAAGTGGCTGCAGCTTAAAATTTGTAAAAGGTGAGGGTGTCCCGGATGAAATCAAAATGCTTCTTAGAAACAGCAAAGCTCTTTTCTTGGATCGGCATTTCACCTTACAGAGTCTATCTGAATGCGAAATGAAAAATATAGAGCAACTACGGGTGTGCATATTGGCAGAATGCAAAGAAATGCAAACAATTGGTGGTGGAGGTGCAGCAAAAGATGATGAGGATATGCTTCCGCATTTGCTATTCTTGAGTTTATTCCACATGAAGAATCTAAGAAGCATCTGGGAGGGCCCAACTCCTCCTCGTAGCTCATTTGGTATGTTACAGTCTTTGTCGTTGCAAAGTTGTCCAAAGTTAATAACTCTCTTCTCTGTGGATTTTCTGGGAAACTTTTCTTTGTTGAAGGAGCTTATAGTGAAGGACTGTCCCAAATTAAGTACATTAGTAAGTTGTCATTCATTCAGGCACATTGCACATACTTTCCTTCCTAAATTGAACAAGTTATTGCTTCTCCATCTCCCTGAATTGACCAGCCTTTCAAGCGGGTTGCACATTGGACCTGTTTTGAAAAAAATAGCATTTTATGACTGCCCAAAGCTGCATAGTCTTTCAACCAGGGAATTGATAAGCCAAGAACTAACGGTAATCAAAGGAGAAAGCAACTGGTGGAGGGAACTAGAAGGTCGACCGTGTAAGTTCGATCAGATATTTTCCCCAATCCATGAAGAGGCTGACATAATGTCTCAATTAGGTACATATGAATATGATGGTGACAACATGGATAGTGGTTCGGGTGGCTCAGTGGCTGCACCATTACATCCCATAGTGGATGCAAATTCACTGGCTTCGAGTGGCAAGGACTTCCAAAAGGGTTCCAGGGTCTCGAAACATAGTTTACCAACCTGGGATATAGAGACAAGTGATTTTATGGAGTATGATGGATACACGTGGAGAAAATATGATCAGAAAGATATTCTGGGCACGGTGCATCGAAGAGAGTATTACAGATGCAACGGACGTGGATGCCCAGCCAAAAAGAGGGTTCAAAGGATTCGTGATGACCCTTCTTTGTACAGAATAACTTACCAGGGGCATCATACTTGCGGTGGTCAAGCACAActcgagttaagccccactttgattggtgagttgcaccgatttagtccctga 3456 0.3996 MSKVGDSTKMKSEAGEFPKMEMKPFNILKTDMNELLKNKTADFFDKTKSEGASASQTSTLTSLKSTNSSLVSKNSLRRKRDLMSLLCSYPLDARMISDDFKSKPYDERQLPLKLKGLLPKEIIRDAENGDRSWSWSGSSFGDAHLDFIPEAILNLAADLSVHQLIQTLISICKSENPNHTKCIRLSTRSDVEKRTVEAKVTAALNDKHNMLDILNSFRRPLTIDASGYPTSEAENELKQHICQLLQLSTIEDDDILCTRQIEDEMSRSRYLVILVDRDGEEIVDPQKVGLCSTLQSGVLVLITTDSPASQQAKEGGLTDELVDLEIRTNDHLLPWVVFCHSVGKKFVYSSSAILTTAAHIVEECRSHLHAILLVAKLLKNHQDVRKWDLALFKLRCFNPSHDFHNFHGSNSIMIKAFLSLIWDGMKKIQQNCLLSCLVIPKIQEGMVDHELMNHWMSYLFLDAGKTEKNLSQLVENSIFLQLNGVGGRYIWLTEETYQILERLHTSYPLFIEKSNLGLTEPSNTDKWHNAVRIELAGNKISELPQSPDCLRLKVLMLQNNADLTKIPSLFFDHMPLLCILNLSYTSVRELPRSLFFLEQLRELYLKGCECFMKLPPEIGNLKKLEKLDLDETQITHLPKEVQKLTNMQSLTLCFYEYRVKKNRSYSCSTIIPSGVLSKLKRLEHLCIGVNPDDERWNENVQAILPEILGLECLKTLSMYIPQLELLKLIPAHIFKLDFRFTVGRHMQRIISSIPPATDVEFKQSGCSLKFVKGEGVPDEIKMLLRNSKALFLDRHFTLQSLSECEMKNIEQLRVCILAECKEMQTIGGGGAAKDDEDMLPHLLFLSLFHMKNLRSIWEGPTPPRSSFGMLQSLSLQSCPKLITLFSVDFLGNFSLLKELIVKDCPKLSTLVSCHSFRHIAHTFLPKLNKLLLLHLPELTSLSSGLHIGPVLKKIAFYDCPKLHSLSTRELISQELTVIKGESNWWRELEGRPCKFDQIFSPIHEEADIMSQLGTYEYDGDNMDSGSGGSVAAPLHPIVDANSLASSGKDFQKGSRVSKHSLPTWDIETSDFMEYDGYTWRKYDQKDILGTVHRREYYRCNGRGCPAKKRVQRIRDDPSLYRITYQGHHTCGGQAQLELSPTLIGELHRFSP 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00617 1151 Pfam WRKY DNA -binding domain 1075 1130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu10g00617 1151 ProSiteProfiles WRKY domain profile. 1068 1128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu10g00617 1151 Gene3D Ribonuclease Inhibitor 489 742 IPR032675 -
Adu10g00617 1151 SMART LRR_typ_2 574 597 IPR003591 -
Adu10g00617 1151 SMART LRR_typ_2 621 643 IPR003591 -
Adu10g00617 1151 Pfam Leucine rich repeat 551 608 IPR001611 GO:0005515
Adu10g00617 1151 Gene3D WRKY domain 1063 1132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu10g00617 1151 SUPERFAMILY L domain-like 516 966 - -
Adu10g00617 1151 SMART WRKY_cls 1073 1132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu10g00617 1151 Gene3D Ribonuclease Inhibitor 776 978 IPR032675 -
Adu10g00617 1151 PANTHER - 416 998 - -
Adu10g00617 1151 SUPERFAMILY WRKY DNA-binding domain 1072 1131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu10g00617 1151 PANTHER PROTEIN LAP1-LIKE 416 998 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00617 Adu-Chr10 6931911 6935759 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00617 1057 1137 WRKY Transcription Factor Family AT5G22570 45.238 1.71e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu10g00617 LRR_8 9.3e-10 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00617 - - aip:107622712 1614.36