Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00607 ATGTCCTTAACAGGGCGTCCTCGAGTGATCGTGAATGGAGTCCGAAGAACAAGAAGTTTCCACTGTTTCTGGTGCCTTAACTGCCAACGAACAGTGAGAATACCTGCTACCTATCCAAACGGTTCTCTCTGCCCTTATTGCTTCAATAGACTCCGTTACGAGCTTGACATAACAAGGCCAACAAGGTTTCTCTTCACCAACAACAACAATTTGGAACCTTCACCAGCTTCTCAGCTATTGAATGGCCTCGCTCTCATTCTCCATCCACCTCAACACAATCATAACCGATGGGAAGGAGAAGAAGAACAAACACTAGAAAATCAACAAGATCCACGAGCTTGGATTACTCTCAGATTCGTGAGGCCAAATAACAACGGTCCACAGAGACTTATGCCTCCACCGCTGCAGCCGCAACCGCAAGCCAACAATAACAGCGATCCGATTGATCAATTCATTCAAAATTTGGTCGAGAATAATAACAACCGGCCGGGCCCGCCTCCGGCTTCGTCTTCGGCCATCGCAGCGTTGCCGGTGGTGAGGCTGGCGCGAGAACAATTGGCTAGTGATCCGAACTGTGCAATATGCAAAGATGAATTTGAGGTAGATGGAGAAGTGAGGGAGTTGCCGTGCAAGCATTTCTACCATTGCGATTGCATTCTGCCATGGCTGCGCATCCATAATACCTGCCCTGTCTGCCGCTATGAGCTTCCTCCTGTTGCGGCGAGTGAGAATCAGAATAATAATCATAATCATAATATTAATAATAATGAGCAGCAGAGTTTTATTAGCTTCAACTGGATTTTGAGACAAATTGCTTCGATCAGTAGCCCCCTTCGTGCTATCTTGGATTATTGGACTCACAGACATTACTCTAATCACCAAGATAACAATGCTCCTGCTCATGATGATGGAGGTACTATTAGCTCTTGGTGGAGAGAATTGTTCATCTTATAG 954 0.4602 MSLTGRPRVIVNGVRRTRSFHCFWCLNCQRTVRIPATYPNGSLCPYCFNRLRYELDITRPTRFLFTNNNNLEPSPASQLLNGLALILHPPQHNHNRWEGEEEQTLENQQDPRAWITLRFVRPNNNGPQRLMPPPLQPQPQANNNSDPIDQFIQNLVENNNNRPGPPPASSSAIAALPVVRLAREQLASDPNCAICKDEFEVDGEVRELPCKHFYHCDCILPWLRIHNTCPVCRYELPPVAASENQNNNHNHNINNNEQQSFISFNWILRQIASISSPLRAILDYWTHRHYSNHQDNNAPAHDDGGTISSWWRELFIL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00607 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 240 IPR013083 -
Adu10g00607 317 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 22 271 - -
Adu10g00607 317 SUPERFAMILY RING/U-box 173 244 - -
Adu10g00607 317 Pfam Ring finger domain 191 233 IPR001841 -
Adu10g00607 317 ProSiteProfiles Zinc finger RING-type profile. 192 233 IPR001841 -
Adu10g00607 317 Coils Coil 239 259 - -
Adu10g00607 317 MobiDBLite consensus disorder prediction 125 147 - -
Adu10g00607 317 CDD RING-H2_RNF126_like 192 233 - -
Adu10g00607 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 22 271 - -
Adu10g00607 317 SMART ring_2 192 232 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00607 Adu-Chr10 6878326 6879648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00607 1 287 C3H Transcription Factor Family AT1G68180 32.759 1.20e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00607 K11982 - gmx:100793656 294.664