Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00593 ATGGGCATATCTAATACAAACTACAACTCTACCTTAGACATTAACGCTGATCTTAAAGAAGTTAAGGAATTTAGACAAAGGTTTATCATGGGTAATGACAAGCCATCTAACCAGCTTTCTCAAATTGCATCTGATTCATTGATTTCCCTTGAGCAAGATCTTATTAACCATATTCCTTACAAGTCTATAAGCGAACTTAAGGAGAGCACTGAGGGTGGAATATTTGTTACCATTGGAACTGTGATTTCTATTGACACTAGACTAGGTTGGTGGTACAAAGGGTGCAAGATGTGTTTTCATTCACTTAAAGAAGATGAGAATTCATATTATTGCCATGAATGTGATATTTATCCTAATACTCATGTTCCTCGTTTCTGCATTCAAATGAGAGTATCAGATGAGACAGACTCTGCTTCATTTATTGTTTATGACAAGGAAGCCTCCAAATTTCTTGAGATATCTGCTTCTGAGCTTCGTTTGAGACAGATATCAAAGGGTTGCGGCAAGGATGAATTTCCCGTTGAGATTAATTCATTTAGGGGTAAGAAGTTTCTATTCAAGATTTCTGTGAAGCTTGATGATATCAATGCTTTCCAGCCATGCAAGATTACTGTTTTGAAGTTGACTGAAGATCCAAATCTGCTCACTTCTTTTTCTTCCAAGTACAAGACATTTGATAACACCCCAATCGAAAATACTGAGTTGCAGAGTTTGCAAACTGATTCTACTGATAATTCTAAGGAGATTAGTTCACAGTCTTGCGAAATTATTTCTCTTGATGGCAATGATGACTTTGTAACTCCTAAGAGAGGTATGATAGCTGGTGTAACGGCAAAAAATTTGCTGGACATTTTCCCGGATAATGCCACTACTTCATCATCCAAATGCCGGAAGCTCTCCAAGGAGTCTGATTGTAGCTTTGTCAAAGAGCATGTTGATTAA 942 0.3715 MGISNTNYNSTLDINADLKEVKEFRQRFIMGNDKPSNQLSQIASDSLISLEQDLINHIPYKSISELKESTEGGIFVTIGTVISIDTRLGWWYKGCKMCFHSLKEDENSYYCHECDIYPNTHVPRFCIQMRVSDETDSASFIVYDKEASKFLEISASELRLRQISKGCGKDEFPVEINSFRGKKFLFKISVKLDDINAFQPCKITVLKLTEDPNLLTSFSSKYKTFDNTPIENTELQSLQTDSTDNSKEISSQSCEIISLDGNDDFVTPKRGMIAGVTAKNLLDIFPDNATTSSSKCRKLSKESDCSFVKEHVD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00593 313 PANTHER REPLICATION FACTOR A 1, RFA1 78 232 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu10g00593 313 CDD RPA1_DBD_C 63 217 IPR013955 -
Adu10g00593 313 PANTHER BNAC01G35430D PROTEIN 78 232 - -
Adu10g00593 313 Gene3D - 51 217 IPR012340 -
Adu10g00593 313 Pfam Replication factor-A C terminal domain 76 209 IPR013955 -
Adu10g00593 313 SUPERFAMILY Nucleic acid-binding proteins 58 211 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00593 Adu-Chr10 6724939 6726410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00593 91 205 Core DNA Replication Machinery Family AT5G08020 27.586 2.67e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00593 - - adu:107468389 632.484