Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00575 ATGACCACCAAGCCCAAGGGCAATGCCTTGCAGGGCTTGAAGCCCGTGATTCTTATGGTCATAGTTCAGATTGCATTCGCCGGTGTCAACATCCTCTACAAGCTCGCCGTTAATGATGGCATGAGCCTCAGAGTCACTGTCGCCTACCGCTTCATTTTCGCTACTGCTTTCATTGCTCCCTTTGCTCTCTTTTTCGAAAGGAAGAAGAGGGTGAAACTGACATGGATGGTACTATTTCAATCATTTCTATGCGGCTTATTTGGAGGAGCCTTAGCTCAGAATTTCTACCTGGAGGCTCTGGCTTTAACTTCTGCAACGTTTGCATCCGCCATGGCCAACCTCATACCTGCTATTACCTTTGTGATGGCCGTTTGCATAGGTTTGGAAAGATTGAATTTGGGATCAGCAGCAGGGAAGGCGAAAATAATCGGAACAATGGCCGGAATTGCAGGAGCAATGGTTCTGACTTTCGTGAAAGGCCCGGAAATCCAGATTTCATCGCATGTTAACCTTATGAATCACAGAAACAATAGTTCTATGGCGGCTCATGGCGGCGGTGGTAGAACGGTGTTGGGATCTGTGTGCGCGTTGGCGAGCGGGATCTCTTACGCACTGTGGCTCATCATACAGACAAAGATGAGTGAGAGGTATCCAAGCTATTACTCGAGCACTGCGCTCATGTCTCTCTGGGCGGCGATCTTGTCCACGGCGTTCGCTCTTTCCGTCGAAAACGATTGGAGTCAGTGGAGGCTTGGTTGGAACATTAGGCTTCTGACGGTTGCTTATTCCGGCATGGTTGTTTCTGGAATGATGGTGGCTGTGATCTCCTGGTGCGTCCGCATGAGAGGGCCCTTGTTCGCCTCTGTTTTCAGCCCTCTCTTGCTCGTCATTGTCGCCGTGGCTAGCTCCACCGTCTTGAACGAGAAGCTGTACCTTGGAAGCTTCATCGGAGCGGTGTTGATTGTGTGTGGGTTATATGCTGTTCTTTGGGGGAAAAGCAAAGAGAGGAAGAAGATGAAGAATATGAGTCAATTACCACAATGCCCTCATGACGATGATGATGACACTGTACAAGTAATTGTGGCCAGGTCTAATTCTAAAGTAGGAGAAGATCGTAAAAGCAACAACAATGGACATGTGGATGATAACCAAGGTTCAATAGATCATGatcttgagaagacagataagccaatAACTGTTAGACGTTCTGCTGATGATGAACCTGTTCCTTCCACTAGACCTCCTGTTGATGGGAAAGATATACAAGTTGATAATGATGGTGATGATTTGCATGATGAACCTACACCTCAACCTGAGATGCCAGATGTAGAAGTTCTACCAGATGCTGAAGTTCCACCTGAACCACCAGTTGAGCCTGAATTGAGAATATCTATTAGAGAACGTCATCCTTCTCAGAAAAACTCTTCTCATGAGTATATGATGAACACTGAGACTGGGGAGCCAGAGAGCTACCAGcaaccGGAGGGTTTCGAAGTTAAAGGAAAGGAGCACCTTGTATGCAAGTTGAAGAAGAGCTTATATGGGCTGAACCAAGCGCCAAGGCAGTGGTACACGAAGTTTGATTCCTTCATGGAAGGTCATGGTTATAGTAAGACTTTTTCTGATAATTCTGTgccggatatTACACAAGCCATTGGACTTGTTAGTCAGTTTCTCTCTAATCCTGGCAAGGAACACTGGCAAGCAGTGAAGTGGATTCTCAGATACCTTAATGGTACTTCCAGAGTTTGTTTATGCTTTGGGAGTGGCCAACCTGTGTTGGATGGTTACATAGATGCGGATATGGCTGGGGATCATGATTCAAGGAAGTCTACTTCTGGTTATATGATGACTTTTGCAGGAAGAGTTGTGTCGACTTCAAAAATGTGTTGTTTTGTCTACTACAGAGGCAGAATACAACTTCAAAAATGGAGTTGTATCCCCACTTGA 1950 0.4523 MTTKPKGNALQGLKPVILMVIVQIAFAGVNILYKLAVNDGMSLRVTVAYRFIFATAFIAPFALFFERKKRVKLTWMVLFQSFLCGLFGGALAQNFYLEALALTSATFASAMANLIPAITFVMAVCIGLERLNLGSAAGKAKIIGTMAGIAGAMVLTFVKGPEIQISSHVNLMNHRNNSSMAAHGGGGRTVLGSVCALASGISYALWLIIQTKMSERYPSYYSSTALMSLWAAILSTAFALSVENDWSQWRLGWNIRLLTVAYSGMVVSGMMVAVISWCVRMRGPLFASVFSPLLLVIVAVASSTVLNEKLYLGSFIGAVLIVCGLYAVLWGKSKERKKMKNMSQLPQCPHDDDDDTVQVIVARSNSKVGEDRKSNNNGHVDDNQGSIDHDLEKTDKPITVRRSADDEPVPSTRPPVDGKDIQVDNDGDDLHDEPTPQPEMPDVEVLPDAEVPPEPPVEPELRISIRERHPSQKNSSHEYMMNTETGEPESYQQPEGFEVKGKEHLVCKLKKSLYGLNQAPRQWYTKFDSFMEGHGYSKTFSDNSVPDITQAIGLVSQFLSNPGKEHWQAVKWILRYLNGTSRVCLCFGSGQPVLDGYIDADMAGDHDSRKSTSGYMMTFAGRVVSTSKMCCFVYYRGRIQLQKWSCIPT 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00575 649 MobiDBLite consensus disorder prediction 366 408 - -
Adu10g00575 649 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020|GO:0016021
Adu10g00575 649 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020|GO:0016021
Adu10g00575 649 MobiDBLite consensus disorder prediction 419 438 - -
Adu10g00575 649 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 491 538 IPR013103 -
Adu10g00575 649 PANTHER WAT1-RELATED PROTEIN 14 365 IPR030184 GO:0016021|GO:0022857
Adu10g00575 649 MobiDBLite consensus disorder prediction 364 457 - -
Adu10g00575 649 PANTHER WAT1-RELATED PROTEIN 14 365 - -
Adu10g00575 649 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Adu10g00575 649 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00575 Adu-Chr10 6521439 6528736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00575 13 354 Nodulin-like Gene Family AT1G25270 43.478 2.35e-91 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00575 - - aip:107620100 722.235