Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00573 ATGGCTGATGGTGAGGACATTCAACCTCTTGTTGTTGACAATGGAACTGGAATGGTCAAGGCTGGTTTTGCTGGTGATGATGCTCCTAGGGCTGTCTTCCCCAGCATTATTGGGCGACCTCGTCACACGGGTGTGATGGTTGGAATGGGTCAGAAGGATGCTTATGTGGGTGATGAAGCCCAGTCAAAAAGGGGTATCCTCACCTTGAAGTACCCTATTGAGCATGGAATTGTCAGTAACTGGGATGATATGGAAAAGATTTGGCATCACACGTTTTACAATGAGCTTCGCGTCGCCCCTGAAGAACACCCTGTGCTTCTTACTGAGGCACCACTCAATCCCAAGGCCAACAGAGAGAAGATGACCCAAATTATGTTTGAAACTTTCAATGTCCCTGCCATGTATGTTGCAATTCAGGCTGTCCTGTCTTTGTATGCCAGTGGACGTACTACAGGTATTGTGCTTGATTCCGGTGATGGTGTGAGCCACACAGTGCCCATATATGAAGGGTATGCACTTCCCCATGCAATTCTTCGGTTGGACCTTGCAGGTCGTGATTTAACAGAGTACTTGGTGAAAATCCTTACTGAGAGAGGATACTCCTTCAATACCTCTGCTGAGAAGGAAATTGTCCGTGATGTGAAGGAGAAATTAGCATATGTTGCCCTTGATTTTGACCAAGAAATGGAAACTACTAAGACTAGTTCAGCAGTGGAGAAGAGCTATGAATTGCCAGATGGACAGGTCATTACAATAGGTGCTGAGCGATTCCGATGCCCTGAAGTACTCTTCCAGCCTTCTCTAATTGGTATGGAAGCTCCAGGAATTCATGAAACTACATACAACTCCATCATGAAATGTGATGTTGATATCAGGAAGGATCTTTATGGAAATATTGTGCTCAGTGGTGGGTCCACTATGTTCCCTGGAATTGCTGATCGGATGAGCAAAGAAATTAGTGCACTTGCTCCAAGCAGCATGAAGATCAAGGTAGTTGCACCCCCTGAGAGGAAGTACAGTGTTTGGATCGGTGGTTCTATCTTGGCATCACTTAGCACCTTTCAGCAGATGTGGATTTCAAAGGGTGAATATGATGAATCTGGACCTGCTATCGTTCATCGGAAGTGCTTCTAA 1134 0.4559 MADGEDIQPLVVDNGTGMVKAGFAGDDAPRAVFPSIIGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLVKILTERGYSFNTSAEKEIVRDVKEKLAYVALDFDQEMETTKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPAIVHRKCF 377
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00573 377 PRINTS Actin signature 28 37 IPR004000 -
Adu10g00573 377 PRINTS Actin signature 51 62 IPR004000 -
Adu10g00573 377 PRINTS Actin signature 63 85 IPR004000 -
Adu10g00573 377 PRINTS Actin signature 117 130 IPR004000 -
Adu10g00573 377 PRINTS Actin signature 142 161 IPR004000 -
Adu10g00573 377 PRINTS Actin signature 238 254 IPR004000 -
Adu10g00573 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Adu10g00573 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Adu10g00573 377 Gene3D - 140 340 - -
Adu10g00573 377 PANTHER ACTIN 1 376 IPR004000 -
Adu10g00573 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Adu10g00573 377 SMART actin_3 7 377 IPR004000 -
Adu10g00573 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Adu10g00573 377 PANTHER ACTIN 1 376 - -
Adu10g00573 377 Pfam Actin 5 377 IPR004000 -
Adu10g00573 377 Gene3D - 10 371 - -
Adu10g00573 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Adu10g00573 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Adu10g00573 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu10g00573 Adu-Chr10 6510684 6512396 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00573 1 377 Cytoskeleton Gene Families AT5G09810 94.695 0.0 752
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00573 K10355 - gmx:100778206 746.117
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00573 10 6510684 6512396 Adu10g00573 10 6510684 6512396 ECH